LOCUS Exported 4100 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pRN-FRT, complete sequence.
ACCESSION KU749551
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4100)
AUTHORS Liu X.
TITLE A Highly Efficient and Simple Construction Strategy for Producing
Recombinant Baculovirus Bombyx mori Nucleopolyhedrovirus
JOURNAL PLoS ONE 11 (3), E0152140 (2016)
PUBMED 27008267
REFERENCE 2 (bases 1 to 4100)
AUTHORS Liu X.
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2016) Biotechnology Research Institute, Chinese
Academy of Agricultural Sciences, No. 12 Zhongguancun South Street,
Beijing, Beijing 100081, China
REFERENCE 3 (bases 1 to 4100)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4100
/organism="Cloning vector pRN-FRT"
/mol_type="other DNA"
/db_xref="taxon:1822056"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 427..474
/label=FRT site
/note="FRT site"
protein_bind complement(427..474)
/label=FRT
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="FLP-mediated recombination occurs in the 8-bp core
sequence TCTAGAAA (Turan and Bode, 2011)."
gene 475..1793
/gene="rpsL-neo"
/label=rpsL-neo
CDS 999..1793
/codon_start=1
/gene="aph(3)-II (or nptII)"
/product="aminoglycoside phosphotransferase from Tn5"
/label=NeoR/KanR
/note="confers resistance to neomycin, kanamycin, and G418
(Geneticin(R))"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
misc_feature 1794..1832
/label=FRT site
/note="FRT site"
protein_bind complement(1794..1827)
/label=FRT (minimal)
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="supports FLP-mediated excision but not integration
(Turan and Bode, 2011)"
primer_bind complement(1879..1895)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1903..1919
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1927..1957)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1972..1993
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2281..2869)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3040..3900)
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/protein_id="AMS25564.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(3901..4005)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 4100 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pRN-FRT, complete sequence.
ACCESSION KU749551
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4100)
AUTHORS Liu X.
TITLE A Highly Efficient and Simple Construction Strategy for Producing
Recombinant Baculovirus Bombyx mori Nucleopolyhedrovirus
JOURNAL PLoS ONE 11 (3), E0152140 (2016)
PUBMED 27008267
REFERENCE 2 (bases 1 to 4100)
AUTHORS Liu X.
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2016) Biotechnology Research Institute, Chinese
Academy of Agricultural Sciences, No. 12 Zhongguancun South Street,
Beijing, Beijing 100081, China
REFERENCE 3 (bases 1 to 4100)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4100
/organism="Cloning vector pRN-FRT"
/mol_type="other DNA"
/db_xref="taxon:1822056"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 427..474
/label=FRT site
/note="FRT site"
protein_bind complement(427..474)
/label=FRT
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="FLP-mediated recombination occurs in the 8-bp core
sequence TCTAGAAA (Turan and Bode, 2011)."
gene 475..1793
/gene="rpsL-neo"
/label=rpsL-neo
CDS 999..1793
/codon_start=1
/gene="aph(3)-II (or nptII)"
/product="aminoglycoside phosphotransferase from Tn5"
/label=NeoR/KanR
/note="confers resistance to neomycin, kanamycin, and G418
(Geneticin(R))"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
misc_feature 1794..1832
/label=FRT site
/note="FRT site"
protein_bind complement(1794..1827)
/label=FRT (minimal)
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="supports FLP-mediated excision but not integration
(Turan and Bode, 2011)"
primer_bind complement(1879..1895)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1903..1919
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1927..1957)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1972..1993
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2281..2869)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3040..3900)
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/protein_id="AMS25564.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(3901..4005)
/gene="bla"
/label=AmpR promoter