| 载体基本信息 |
| 载体名称 |
pRM-vgb |
载体抗性 |
Kanamycin |
| 载体长度 |
8933 bp |
载体类型 |
Protein fusion vector |
| 载体来源 |
Mora-Lugo R, Madrigal M, Yelemane V, Fernandez-Lahore M. |
pRM-vgb 载体载体图谱
pRM-vgb 载体载体序列
LOCUS Exported 8933 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Protein fusion vector pRM-vgb, complete sequence.
ACCESSION KT225581
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8933)
AUTHORS Mora-Lugo R, Madrigal M, Yelemane V, Fernandez-Lahore M.
TITLE Improved biomass and protein production in solid-state cultures of
an Aspergillus sojae strain harboring the Vitreoscilla hemoglobin
JOURNAL Appl. Microbiol. Biotechnol. 99 (22), 9699-9708 (2015)
PUBMED 26224427
REFERENCE 2 (bases 1 to 8933)
AUTHORS Mora-Lugo R, Madrigal M, Yelemane V, Fernandez-Lahore M.
TITLE Direct Submission
JOURNAL Submitted (30-JUN-2015) School of Engineering and Science, Jacobs
University Bremen gGmbH, Campus Ring 1, Bremen, Bremen 28759,
Germany
REFERENCE 3 (bases 1 to 8933)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..8933
/organism="Protein fusion vector pRM-vgb"
/mol_type="other DNA"
/db_xref="taxon:1697352"
intron 1177..1292
/gene="gpdA"
/label=gpdA intron
/note="intron from the Aspergillus nidulans
glyceraldehyde-3-phosphate dehydrogenase gene (Punt et al.,
1990)"
CDS 1334..2521
/codon_start=1
/product="vgb/egfp fusion protein"
/label=vgb/egfp fusion protein
/note="vgb fused to the 5end of the reporter egfp"
/protein_id="AKU37545.1"
/translation="MLDQQTINIIKATVPVLKEHGVTITTTFYKNLFAKHPEVRPLFDM
GRQESLEQPKALAMTVLAAAQNIENLPAILPAVKKIAVKHCQAGVAAAHYPIVGQELLG
AIKEVLGDAATDDILDAWGKAYGVIADVFIQVEADLYAQAVEDLASKLGTQLMVSKGEE
LFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLT
YGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIE
LKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQ
QNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITLGMDELYK"
CDS 1802..2521
/codon_start=1
/product="enhanced GFP"
/label=EGFP
/note="mammalian codon-optimized"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
VNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITLGMDELYK"
primer_bind complement(2554..2570)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 2806..2830
/label=LB T-DNA repeat
/note="left border repeat from nopaline C58 T-DNA"
CDS complement(2956..4104)
/codon_start=1
/product="trans-acting replication protein that binds to
and activates oriV"
/label=trfA
/translation="MNRTFDRKAYRQELIDAGFSAEDAETIASRTVMRAPRETFQSVGS
MVQQATAKIERDSVQLAPPALPAPSAAVERSRRLEQEAAGLAKSMTIDTRGTMTTKKRK
TAGEDLAKQVSEAKQAALLKHTKQQIKEMQLSLFDIAPWPDTMRAMPNDTARSALFTTR
NKKIPREALQNKVIFHVNKDVKITYTGVELRADDDELVWQQVLEYAKRTPIGEPITFTF
YELCQDLGWSINGRYYTKAEECLSRLQATAMGFTSDRVGHLESVSLLHRFRVLDRGKKT
SRCQVLIDEEIVVLFAGDHYTKFIWEKYRKLSPTARRMFDYFSSHREPYPLKLETFRLM
CGSDSTRVKKWREQVGEACEELRGSGLVEHAWVNDDLVHCKR"
CDS complement(4403..5197)
/codon_start=1
/gene="aphA-3"
/product="aminoglycoside phosphotransferase"
/label=KanR
/note="confers resistance to kanamycin"
/translation="MAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKM
TDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED
EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT
PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIA
FCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF"
rep_origin 5479..6110
/label=oriV
/note="incP origin of replication"
misc_feature 6249..6273
/label=RB T-DNA repeat
/note="right border repeat from nopaline C58 T-DNA"
CDS complement(7112..7486)
/codon_start=1
/gene="Sh ble from Streptoalloteichus hindustanus"
/product="antibiotic-binding protein"
/label=BleoR
/note="confers resistance to bleomycin, phleomycin, and
Zeocin(TM)"
/translation="MAKLTSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDD
VTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGR
EFALRDPAGNCVHFVAEEQD"
promoter 7933..1128
/gene="gpdA"
/label=gpdA promoter
/note="promoter from the Aspergillus nidulans
glyceraldehyde-3-phosphate dehydrogenase gene (Punt et al.,
1990)"