Kimura T, Nakao A, Murata S, Kobayashi Y, Tanaka Y, Shibahara K, Kawazu T, Nakagawa T.
pRED419-Amp 载体载体图谱
pRED419-Amp 载体载体序列
LOCUS Exported 5401 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Gateway recycling vector pRED419-Amp DNA, complete sequence.
ACCESSION AB752382
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5401)
AUTHORS Kimura T, Nakao A, Murata S, Kobayashi Y, Tanaka Y, Shibahara K,
Kawazu T, Nakagawa T.
TITLE Development of the gateway recycling cloning system for multiple
linking of expression cassettes in a defined order, and direction on
gateway compatible binary vectors
JOURNAL Biosci. Biotechnol. Biochem. 77 (2), 430-434 (2013)
PUBMED 23391940
REFERENCE 2 (bases 1 to 5401)
AUTHORS Kimura T, Shibahara K, Tanaka Y, Nakao A, Kawazu T, Nakagawa T.
TITLE Direct Submission
JOURNAL Submitted (02-OCT-2012) Contact:Tsuyoshi Nakagawa Shimane
University, Center for Integrated Research in Science; 1060
Nishikawatsu, Matsue, Shimane 690-8504, Japan
REFERENCE 3 (bases 1 to 5401)
AUTHORS .
TITLE Direct Submission
COMMENT constructed using pDONR201.
FEATURES Location/Qualifiers
source 1..5401
/organism="Gateway recycling vector pRED419-Amp"
/mol_type="other DNA"
/db_xref="taxon:1237883"
misc_feature complement(28..127)
/label=attL1
/note="attL1"
protein_bind 28..127
/gene="mutant version of attL"
/label=attL1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
primer_bind 159..175
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 188..244
/label=multi cloning sites
/note="multi cloning sites"
primer_bind complement(245..261)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature complement(803..927)
/label=attR4
/note="attR4"
protein_bind 803..927
/gene="mutant version of attR"
/label=attR4
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
promoter 952..982
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
misc_feature 1254..1294
/label=rare cutter sites
/note="rare cutter sites"
promoter 1325..1429
/gene="bla"
/label=AmpR promoter
CDS 1430..2290
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin resistance"
/protein_id="BAM62106.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 1430..2290
/gene="bla"
/label=bla
misc_feature 2645..2769
/label=attR3
/note="attR3"
protein_bind complement(2645..2768)
/gene="mutant version of attR"
/label=attR3
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_feature 3274..3373
/label=attL2
/note="attL2"
protein_bind complement(3274..3373)
/gene="mutant version of attL"
/label=attL2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
CDS 3496..4305
/codon_start=1
/gene="kan"
/product="kanamycin resistance protein"
/label=kan
/protein_id="BAM62107.1"
/translation="MSHIQRETSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYGKP
DAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGKTA
FQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASD
FDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD
RYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
gene 3496..4305
/gene="kan"
/label=kan
rep_origin 4426..5065
/label=pUC origin
/note="pUC origin"
rep_origin 4448..5036
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
terminator 5171..5198
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
terminator 5290..5376
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
Kimura T, Nakao A, Murata S, Kobayashi Y, Tanaka Y, Shibahara K, Kawazu T, Nakagawa T.
pRED419-Amp 载体载体图谱
pRED419-Amp 载体载体序列
LOCUS Exported 5401 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Gateway recycling vector pRED419-Amp DNA, complete sequence.
ACCESSION AB752382
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5401)
AUTHORS Kimura T, Nakao A, Murata S, Kobayashi Y, Tanaka Y, Shibahara K,
Kawazu T, Nakagawa T.
TITLE Development of the gateway recycling cloning system for multiple
linking of expression cassettes in a defined order, and direction on
gateway compatible binary vectors
JOURNAL Biosci. Biotechnol. Biochem. 77 (2), 430-434 (2013)
PUBMED 23391940
REFERENCE 2 (bases 1 to 5401)
AUTHORS Kimura T, Shibahara K, Tanaka Y, Nakao A, Kawazu T, Nakagawa T.
TITLE Direct Submission
JOURNAL Submitted (02-OCT-2012) Contact:Tsuyoshi Nakagawa Shimane
University, Center for Integrated Research in Science; 1060
Nishikawatsu, Matsue, Shimane 690-8504, Japan
REFERENCE 3 (bases 1 to 5401)
AUTHORS .
TITLE Direct Submission
COMMENT constructed using pDONR201.
FEATURES Location/Qualifiers
source 1..5401
/organism="Gateway recycling vector pRED419-Amp"
/mol_type="other DNA"
/db_xref="taxon:1237883"
misc_feature complement(28..127)
/label=attL1
/note="attL1"
protein_bind 28..127
/gene="mutant version of attL"
/label=attL1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
primer_bind 159..175
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 188..244
/label=multi cloning sites
/note="multi cloning sites"
primer_bind complement(245..261)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature complement(803..927)
/label=attR4
/note="attR4"
protein_bind 803..927
/gene="mutant version of attR"
/label=attR4
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
promoter 952..982
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
misc_feature 1254..1294
/label=rare cutter sites
/note="rare cutter sites"
promoter 1325..1429
/gene="bla"
/label=AmpR promoter
CDS 1430..2290
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin resistance"
/protein_id="BAM62106.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 1430..2290
/gene="bla"
/label=bla
misc_feature 2645..2769
/label=attR3
/note="attR3"
protein_bind complement(2645..2768)
/gene="mutant version of attR"
/label=attR3
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_feature 3274..3373
/label=attL2
/note="attL2"
protein_bind complement(3274..3373)
/gene="mutant version of attL"
/label=attL2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
CDS 3496..4305
/codon_start=1
/gene="kan"
/product="kanamycin resistance protein"
/label=kan
/protein_id="BAM62107.1"
/translation="MSHIQRETSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYGKP
DAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGKTA
FQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASD
FDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD
RYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
gene 3496..4305
/gene="kan"
/label=kan
rep_origin 4426..5065
/label=pUC origin
/note="pUC origin"
rep_origin 4448..5036
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
terminator 5171..5198
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
terminator 5290..5376
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"