| 载体基本信息 |
| 载体名称 |
pPZP200BAR |
载体抗性 |
Spectinomycin/Streptomycin |
| 载体长度 |
7937 bp |
载体类型 |
Binary vector |
| 载体来源 |
Jozefkowicz C, Soto GC. |
pPZP200BAR 载体载体图谱
pPZP200BAR 载体载体序列
LOCUS Exported 7937 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Binary vector pPZP200BAR, complete sequence.
ACCESSION KX227611
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7937)
AUTHORS Jozefkowicz C, Soto GC.
TITLE Direct Submission
JOURNAL Submitted (08-MAY-2016) Instituto de Genetica Ewald A. Favret
(IGEAF), National Institute of Agricultural Technology, Nicolas
Repetto y de los Reseros, Hurlingham, Buenos Aires 1686, Argentina
REFERENCE 2 (bases 1 to 7937)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: Sequencher v. 4.1.4
Assembly Name :: pPZP200BAR
Coverage :: 300x
Sequencing Technology :: 454; Illumina
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..7937
/organism="Binary vector pPZP200BAR"
/mol_type="other DNA"
/db_xref="taxon:1867894"
misc_recomb 113..138
/label=right border sequence
/note="right border sequence"
misc_feature 114..138
/label=RB T-DNA repeat
/note="right border repeat from nopaline C58 T-DNA"
misc_feature 195..236
/label=MCS
/note="MCS"
regulatory 251..503
/regulatory_class="promoter"
/note="nos promoter"
promoter 334..513
/label=NOS promoter
/note="nopaline synthase promoter"
misc_feature 562..617
/label=TMV Omega
/note="translational enhancer from the tobacco mosaic virus
5-leader sequence (Gallie et al., 1988)"
CDS 619..1170
/codon_start=1
/product="Bar"
/label=Bar
/protein_id="ANN46247.1"
/translation="MSPERRPADIRRATEADMPAVCTIVNHYIETSTVNFRTEPQEPQE
WTDDLVRLRERYPWLVAEVDGEVAGIAYAGPWKARNAYDWTAESTVYVSPRHQRTGLGS
TLYTHLLKSLEAQGFKSVVAVIGLPNDPSVRMHEALGYAPRGMLRAAGFKHGNWHDVGF
WQLDFSLPVPPRPVLPVTEI"
terminator 1189..1441
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
regulatory 1189..1431
/regulatory_class="terminator"
/note="nos terminator"
misc_recomb 1519..1544
/label=left border sequence
/note="left border sequence"
misc_feature 1519..1543
/label=LB T-DNA repeat
/note="left border repeat from nopaline C58 T-DNA"
CDS 1927..2859
/codon_start=1
/product="SpecR"
/label=SpecR
/protein_id="ANN46248.1"
/translation="MTCFFGVQSMPRASKQQARYAVGRCLMLWSSNDVTQQGSRPKTKL
NIMGEAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVR
LDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRND
ILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNS
PPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQ
EEDRLASRADQLEEFVHYVKGEITKVVGK"
CDS 2068..2859
/codon_start=1
/gene="aadA"
/product="aminoglycoside adenylyltransferase (Murphy,
1985)"
/label=SmR
/note="confers resistance to spectinomycin and
streptomycin"
/translation="MGEAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
rep_origin 3103..3691
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 3877..4017
/label=bom
/note="basis of mobility region from pBR322"
rep_origin 4361..4555
/label=pVS1 oriV
/note="origin of replication for the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
CDS complement(4621..5688)
/codon_start=1
/product="replication protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
/label=pVS1 RepA
/translation="GRKPSGPVQIGAALGDDLVEKLKAAQAAQRQRIEAEARPGESWQA
AADRIRKESRQPPAAGAPSIRKPPKGDEQPDFFVPMLYDVGTRDSRSIMDVAVFRLSKR
DRRAGEVIRYELPDGHVEVSAGPAGMASVWDYDLVLMAVSHLTESMNRYREGKGDKPGR
VFRPHVADVLKFCRRADGGKQKDDLVETCIRLNTTHVAMQRTKKAKNGRLVTVSEGEAL
ISRYKIVKSETGRPEYIEIELADWMYREITEGKNPDVLTVHPDYFLIDPGIGRFLYRLA
RRAAGKAEARWLFKTIYERSGSAGEFKKFCFTVRKLIGSNDLPEYDLKEEAGQAGPILV
MRYRNLIEGEASAGS"
CDS complement(6122..6751)
/codon_start=1
/product="stability protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
/label=pVS1 StaA
/translation="MKVIAVLNQKGGSGKTTIATHLARALQLAGADVLLVDSDPQGSAR
DWAAVREDQPLTVVGIDRPTIDRDVKAIGRRDFVVIDGAPQAADLAVSAIKAADFVLIP
VQPSPYDIWATADLVELVKQRIEVTDGRLQAAFVVSRAIKGTRIGGEVAEALAGYELPI
LESRITQRVSYPGTAAAGTTVLESEPEGDAAREVQALAAEIKSKLI"
CDS complement(7050..7736)
/codon_start=1
/product="resolvase"
/label=resolvase
/protein_id="ANN46249.1"
/translation="MNKSAAAGLLGYARVSTDDQDLTNQRAELHAAGCTKLFSEKITGT
RRDRPELARMLDHLRPGDVVTVTRLDRLARSTRDLLDIAERIQEAGAGLRSLAEPWADT
TTPAGRMVLTVFAGIAEFERSLIIDRTRSGREAAKARGVKFGPRPTLTPAQIAHARELI
DQEGRTVKEAAALLGVHRSTLYRALERSEEVTPTEARRRGAFREDALTEADALAAAENE
RQEEQA"