LOCUS Exported 6638 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pPV529, complete sequence.
ACCESSION KY852488
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6638)
AUTHORS Shao H, Li X, Lok JB.
TITLE Heritable genetic transformation of Strongyloides stercoralis by
microinjection of plasmid DNA constructs into the male germline
JOURNAL Int. J. Parasitol. (2017) In press
PUBMED 28577882
REFERENCE 2 (bases 1 to 6638)
AUTHORS Shao H, Li X, Lok JB.
TITLE Direct Submission
JOURNAL Submitted (28-MAR-2017) Pathobiology, University of Pennsylvania,
3800 Spruce Street, Rosenthal 212, Philadelphia, PA 19104, USA
REFERENCE 3 (bases 1 to 6638)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..6638
/organism="Cloning vector pPV529"
/mol_type="other DNA"
/db_xref="taxon:2008619"
promoter 27..131
/gene="bla"
/label=AmpR promoter
CDS 132..992
/codon_start=1
/gene="ampR"
/product="ampicillin resistance protein"
/label=ampR
/protein_id="ARW80045.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 132..992
/gene="ampR"
/label=ampR
rep_origin 1163..1751
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2039..2060
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2075..2105
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2113..2129
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2137..2153
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
mobile_element 2644..2678
/mobile_element_type="transposon:PiggyBac ITR"
regulatory 2954..4116
/regulatory_class="promoter"
CDS join(4129..4299,4351..4504,4556..4719,4771..4998)
/codon_start=1
/gene="gfp"
/product="green fluorescent protein"
/label=gfp
/note="GFP"
/protein_id="ARW80044.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFCYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
gene 4129..4998
/gene="gfp"
/label=gfp
3UTR 5018..5604
/gene="Ss era-1"
gene 5018..5604
/gene="Ss era-1"
/label=Ss era-1
primer_bind 5618..5634
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
mobile_element 5831..5893
/mobile_element_type="transposon:PiggyBac ITR"
primer_bind complement(6023..6039)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 6181..6636
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
LOCUS Exported 6638 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pPV529, complete sequence.
ACCESSION KY852488
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6638)
AUTHORS Shao H, Li X, Lok JB.
TITLE Heritable genetic transformation of Strongyloides stercoralis by
microinjection of plasmid DNA constructs into the male germline
JOURNAL Int. J. Parasitol. (2017) In press
PUBMED 28577882
REFERENCE 2 (bases 1 to 6638)
AUTHORS Shao H, Li X, Lok JB.
TITLE Direct Submission
JOURNAL Submitted (28-MAR-2017) Pathobiology, University of Pennsylvania,
3800 Spruce Street, Rosenthal 212, Philadelphia, PA 19104, USA
REFERENCE 3 (bases 1 to 6638)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..6638
/organism="Cloning vector pPV529"
/mol_type="other DNA"
/db_xref="taxon:2008619"
promoter 27..131
/gene="bla"
/label=AmpR promoter
CDS 132..992
/codon_start=1
/gene="ampR"
/product="ampicillin resistance protein"
/label=ampR
/protein_id="ARW80045.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 132..992
/gene="ampR"
/label=ampR
rep_origin 1163..1751
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2039..2060
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2075..2105
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2113..2129
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2137..2153
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
mobile_element 2644..2678
/mobile_element_type="transposon:PiggyBac ITR"
regulatory 2954..4116
/regulatory_class="promoter"
CDS join(4129..4299,4351..4504,4556..4719,4771..4998)
/codon_start=1
/gene="gfp"
/product="green fluorescent protein"
/label=gfp
/note="GFP"
/protein_id="ARW80044.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFCYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
gene 4129..4998
/gene="gfp"
/label=gfp
3UTR 5018..5604
/gene="Ss era-1"
gene 5018..5604
/gene="Ss era-1"
/label=Ss era-1
primer_bind 5618..5634
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
mobile_element 5831..5893
/mobile_element_type="transposon:PiggyBac ITR"
primer_bind complement(6023..6039)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 6181..6636
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"