Shao H, Li X, Nolan TJ, Massey HC Jr., Pearce EJ, Lok JB.
pPV257 载体载体图谱
pPV257 载体载体序列
LOCUS Exported 5567 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION PiggyBac_helper_T7_transposase vector pPV257, complete sequence.
ACCESSION JX017375
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5567)
AUTHORS Shao H, Li X, Nolan TJ, Massey HC Jr., Pearce EJ, Lok JB.
TITLE Transposon-mediated Chromosomal Integration of Transgenes in the
Parasitic Nematode Strongyloides ratti and Establishment of Stable
Transgenic Lines
JOURNAL PLoS Pathog. 8 (8), E1002871 (2012)
PUBMED 22912584
REFERENCE 2 (bases 1 to 5567)
AUTHORS Shao H, Li X, Nolan TJ, Massey HC Jr., Pearce EJ, Lok JB.
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2012) Pathobiology, University of Pennsylvania,
3800 Spruce Street, Philadelphia, PA 19104, USA
REFERENCE 3 (bases 1 to 5567)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5567
/organism="piggyBac-helper T7 transposase vector pPV257"
/mol_type="other DNA"
/db_xref="taxon:1212770"
regulatory 42..51
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS complement(252..1046)
/codon_start=1
/gene="aph(3)-II (or nptII)"
/product="aminoglycoside phosphotransferase from Tn5"
/label=NeoR/KanR
/note="confers resistance to neomycin, kanamycin, and G418
(Geneticin(R))"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKASMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
CDS complement(1395..1697)
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/label=ccdB
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="QFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDKV
SRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
primer_bind 1835..1851
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 1858..1876
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
regulatory 1859..1877
/regulatory_class="promoter"
/gene="T7"
gene 1859..1877
/gene="T7"
/label=T7
CDS 1977..3761
/codon_start=1
/product="piggyBac transposase"
/label=piggyBac transposase
/protein_id="AFN89785.1"
/translation="MGCSLDDEHILSALLQSDDELVGEDSDSEISDHVSEDDVQSDTEE
AFIDEVHEVQPTSSGSEILDEQNVIEQPGSSLASNRILTLPQRTIRGKNKHCWSTSKST
RRSRVSALNIVRSQRGPTRMCRNIYDPLLCFKLFFTDEIISEIVKWTNAEISLKRRESM
TGATFRDTNEDEIYAFFGILVMTAVRKDNHMSTDDLFDRSLSMVYVSVMSRDRFDFLIR
CLRMDDKSIRPTLRENDVFTPVRKIWDLFIHQCIQNYTPGAHLTIDEQLLGFRGRCPFR
MYIPNKPSKYGIKILMMCDSGTKYMINGMPYLGRGTQTNGVPLGEYYVKELSKPVHGSC
RNITCDNWFTSIPLAKNLLQEPYKLTIVGTVRSNKREIPEVLKNSRSRPVGTSMFCFDG
PLTLVSYKPKPAKMVYLLSSCDEDASINESTGKPQMVMYYNQTKGGVDTLDQMCSVMTC
SRKTNRWPMALLYGMINIACINSFIIYSHNVSSKGEKVQSRKKFMRNLYMSLTSSFMRK
RLEAPTLKRYLRDNISNILPNEVPGTSDDSTEEPVMKKRTYCTYCPSKIRRKANASCKK
CKKVICREHNIDMCQSCF"
promoter complement(4074..4092)
/label=SP6 promoter
/note="promoter for bacteriophage SP6 RNA polymerase"
primer_bind complement(4110..4126)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4134..4150
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4158..4188)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4203..4224
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4512..5100)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5238..45)
/codon_start=1
/gene="Sh ble from Streptoalloteichus hindustanus"
/product="antibiotic-binding protein"
/label=BleoR
/note="confers resistance to bleomycin, phleomycin, and
Zeocin(TM)"
/translation="MAKLTSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDD
VTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGR
EFALRDPAGNCVHFVAEEQD"
Shao H, Li X, Nolan TJ, Massey HC Jr., Pearce EJ, Lok JB.
pPV257 载体载体图谱
pPV257 载体载体序列
LOCUS Exported 5567 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION PiggyBac_helper_T7_transposase vector pPV257, complete sequence.
ACCESSION JX017375
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5567)
AUTHORS Shao H, Li X, Nolan TJ, Massey HC Jr., Pearce EJ, Lok JB.
TITLE Transposon-mediated Chromosomal Integration of Transgenes in the
Parasitic Nematode Strongyloides ratti and Establishment of Stable
Transgenic Lines
JOURNAL PLoS Pathog. 8 (8), E1002871 (2012)
PUBMED 22912584
REFERENCE 2 (bases 1 to 5567)
AUTHORS Shao H, Li X, Nolan TJ, Massey HC Jr., Pearce EJ, Lok JB.
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2012) Pathobiology, University of Pennsylvania,
3800 Spruce Street, Philadelphia, PA 19104, USA
REFERENCE 3 (bases 1 to 5567)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5567
/organism="piggyBac-helper T7 transposase vector pPV257"
/mol_type="other DNA"
/db_xref="taxon:1212770"
regulatory 42..51
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS complement(252..1046)
/codon_start=1
/gene="aph(3)-II (or nptII)"
/product="aminoglycoside phosphotransferase from Tn5"
/label=NeoR/KanR
/note="confers resistance to neomycin, kanamycin, and G418
(Geneticin(R))"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKASMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
CDS complement(1395..1697)
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/label=ccdB
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="QFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDKV
SRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
primer_bind 1835..1851
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 1858..1876
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
regulatory 1859..1877
/regulatory_class="promoter"
/gene="T7"
gene 1859..1877
/gene="T7"
/label=T7
CDS 1977..3761
/codon_start=1
/product="piggyBac transposase"
/label=piggyBac transposase
/protein_id="AFN89785.1"
/translation="MGCSLDDEHILSALLQSDDELVGEDSDSEISDHVSEDDVQSDTEE
AFIDEVHEVQPTSSGSEILDEQNVIEQPGSSLASNRILTLPQRTIRGKNKHCWSTSKST
RRSRVSALNIVRSQRGPTRMCRNIYDPLLCFKLFFTDEIISEIVKWTNAEISLKRRESM
TGATFRDTNEDEIYAFFGILVMTAVRKDNHMSTDDLFDRSLSMVYVSVMSRDRFDFLIR
CLRMDDKSIRPTLRENDVFTPVRKIWDLFIHQCIQNYTPGAHLTIDEQLLGFRGRCPFR
MYIPNKPSKYGIKILMMCDSGTKYMINGMPYLGRGTQTNGVPLGEYYVKELSKPVHGSC
RNITCDNWFTSIPLAKNLLQEPYKLTIVGTVRSNKREIPEVLKNSRSRPVGTSMFCFDG
PLTLVSYKPKPAKMVYLLSSCDEDASINESTGKPQMVMYYNQTKGGVDTLDQMCSVMTC
SRKTNRWPMALLYGMINIACINSFIIYSHNVSSKGEKVQSRKKFMRNLYMSLTSSFMRK
RLEAPTLKRYLRDNISNILPNEVPGTSDDSTEEPVMKKRTYCTYCPSKIRRKANASCKK
CKKVICREHNIDMCQSCF"
promoter complement(4074..4092)
/label=SP6 promoter
/note="promoter for bacteriophage SP6 RNA polymerase"
primer_bind complement(4110..4126)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4134..4150
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4158..4188)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4203..4224
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4512..5100)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5238..45)
/codon_start=1
/gene="Sh ble from Streptoalloteichus hindustanus"
/product="antibiotic-binding protein"
/label=BleoR
/note="confers resistance to bleomycin, phleomycin, and
Zeocin(TM)"
/translation="MAKLTSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDD
VTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGR
EFALRDPAGNCVHFVAEEQD"