LOCUS Exported 3877 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pPV2 DNA, complete sequence.
ACCESSION AB038599
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3877)
AUTHORS Hashinaka K.
TITLE Synthetic Autonomous Vectors Based on Palindromic Sequences of
Parvovirus B19
JOURNAL Published Only in Database (2001)
REFERENCE 2 (bases 1 to 3877)
AUTHORS Hashinaka K.
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2000) Kazuya Hashinaka, Miyazaki Medical College,
Department of Biochemistry; 5200 Kihara, Kiyotake, Miyazaki
889-1692, Japan (E-mail:hasinaka@post1.miyazaki-med.ac.jp,
Tel:81-985-85-0985, Fax:81-985-85-2401)
REFERENCE 3 (bases 1 to 3877)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3877
/organism="Cloning vector pPV2"
/focus
/mol_type="other DNA"
/db_xref="taxon:117917"
source 6..479
/organism="Human parvovirus B19"
/mol_type="other DNA"
/label=synonym:Parvovirus B19
/note="synonym:Parvovirus B19"
/db_xref="taxon:10798"
source 494..977
/organism="Human parvovirus B19"
/mol_type="other DNA"
/label=synonym:Parvovirus B19
/note="synonym:Parvovirus B19"
/db_xref="taxon:10798"
repeat_region 9..391
repeat_region 586..968
promoter complement(986..1004)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(1011..1027)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 1168..1623
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 1704..1808
/gene="bla"
/label=AmpR promoter
CDS 1809..2669
/codon_start=1
/gene="ampR"
/product="beta-lactamase"
/label=ampR
/protein_id="BAB32736.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCHTLLSRIDAGQEQLGRRARYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMPTTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 1809..2669
/gene="ampR"
/label=ampR
rep_origin 2840..3428
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3716..3737
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 3752..3782
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3790..3806
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 3814..3830
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 3848..3866
/label=SP6 promoter
/note="promoter for bacteriophage SP6 RNA polymerase"
LOCUS Exported 3877 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pPV2 DNA, complete sequence.
ACCESSION AB038599
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3877)
AUTHORS Hashinaka K.
TITLE Synthetic Autonomous Vectors Based on Palindromic Sequences of
Parvovirus B19
JOURNAL Published Only in Database (2001)
REFERENCE 2 (bases 1 to 3877)
AUTHORS Hashinaka K.
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2000) Kazuya Hashinaka, Miyazaki Medical College,
Department of Biochemistry; 5200 Kihara, Kiyotake, Miyazaki
889-1692, Japan (E-mail:hasinaka@post1.miyazaki-med.ac.jp,
Tel:81-985-85-0985, Fax:81-985-85-2401)
REFERENCE 3 (bases 1 to 3877)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3877
/organism="Cloning vector pPV2"
/focus
/mol_type="other DNA"
/db_xref="taxon:117917"
source 6..479
/organism="Human parvovirus B19"
/mol_type="other DNA"
/label=synonym:Parvovirus B19
/note="synonym:Parvovirus B19"
/db_xref="taxon:10798"
source 494..977
/organism="Human parvovirus B19"
/mol_type="other DNA"
/label=synonym:Parvovirus B19
/note="synonym:Parvovirus B19"
/db_xref="taxon:10798"
repeat_region 9..391
repeat_region 586..968
promoter complement(986..1004)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(1011..1027)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 1168..1623
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 1704..1808
/gene="bla"
/label=AmpR promoter
CDS 1809..2669
/codon_start=1
/gene="ampR"
/product="beta-lactamase"
/label=ampR
/protein_id="BAB32736.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCHTLLSRIDAGQEQLGRRARYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMPTTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 1809..2669
/gene="ampR"
/label=ampR
rep_origin 2840..3428
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3716..3737
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 3752..3782
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3790..3806
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 3814..3830
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 3848..3866
/label=SP6 promoter
/note="promoter for bacteriophage SP6 RNA polymerase"