LOCUS Exported 4520 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Plastid transformation vector pPRV111Aatt, complete sequence.
ACCESSION EF416277
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4520)
AUTHORS Kittiwongwattana C, Lutz K, Clark M, Maliga P.
TITLE Plastid marker gene excision by the phiC31 phage site-specific
recombinase
JOURNAL Plant Mol. Biol. 64 (1-2), 137-143 (2007)
PUBMED 17294253
REFERENCE 2 (bases 1 to 4520)
AUTHORS Kittiwongwattana C, Lutz KA, Clark M, Maliga P.
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) Waksman Institute, Rutgers University, 190
Frelinghuysen Road, Piscataway, NJ 08854, USA
REFERENCE 3 (bases 1 to 4520)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4520
/organism="Plastid transformation vector pPRV111Aatt"
/mol_type="other DNA"
/db_xref="taxon:426714"
misc_feature 1..1167
/note="derived from Nicotiana tabacum plastid sequence in
GenBank Accession Number Z00044; plastid sequence targeting
insertions into the trnV-rps12 intergenic region in pPRV
vectors; described in Nucleic Acids Research (1994)
22:3819-3824"
misc_feature 1188..1244
/note="multiple cloning site; includes HindIII, SphI, PstI,
SalI, XbaI, BamHI, SmaI, KpnI, SacI, EcoRI"
misc_feature 1263..1477
/label=Streptomyces phage phiC31 attP attachment sequence
/note="Streptomyces phage phiC31 attP attachment sequence"
CDS complement(1287..1298)
/codon_start=1
/product="Factor Xa recognition and cleavage site"
/label=Factor Xa site
/translation="IEGR"
protein_bind 1369..1468
/label=phage phi-C31 attP
/bound_moiety="phage phi-C31 integrase"
/note="attachment site of phage phi-C31"
regulatory 1485..1631
/regulatory_class="promoter"
/note="derived from tobacco plastid psbA promoter in
GenBank Accession Number Z00044"
CDS 1632..2423
/codon_start=1
/gene="aadA"
/product="aminoglycoside 3 adenyltransferase"
/label=aadA
/note="confers streptomycin and spectinomycin resistance to
bacteria, plant cells and plastids; derived from Shigella
flexneri AAD in GenBank Accession number X03886"
/protein_id="ABN72555.1"
/translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
gene 1632..2423
/gene="aadA"
/label=aadA
3UTR 2438..2626
/note="derived from Nicotiana tabacum psbA in GenBank
Accession Number Z00044"
misc_feature 2645..2698
/label=Streptomyces phage phiC31 attB attachment sequence
/note="Streptomyces phage phiC31 attB attachment sequence"
protein_bind 2657..2690
/label=attB
/bound_moiety="phage phi-C31 integrase"
/note="minimal attB site for the phi-C31 integrase (Groth
et al., 2000)"
misc_feature 2731..4520
/note="derived from Nicotiana tabacum plastid sequence in
GenBank Accession Number Z00044; plastid sequence targeting
insertions into the trnV-rps12 intergenic region in pPRV
vectors; described in Nucleic Acids Research (1994)
22:3819-3824"
LOCUS Exported 4520 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Plastid transformation vector pPRV111Aatt, complete sequence.
ACCESSION EF416277
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4520)
AUTHORS Kittiwongwattana C, Lutz K, Clark M, Maliga P.
TITLE Plastid marker gene excision by the phiC31 phage site-specific
recombinase
JOURNAL Plant Mol. Biol. 64 (1-2), 137-143 (2007)
PUBMED 17294253
REFERENCE 2 (bases 1 to 4520)
AUTHORS Kittiwongwattana C, Lutz KA, Clark M, Maliga P.
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) Waksman Institute, Rutgers University, 190
Frelinghuysen Road, Piscataway, NJ 08854, USA
REFERENCE 3 (bases 1 to 4520)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4520
/organism="Plastid transformation vector pPRV111Aatt"
/mol_type="other DNA"
/db_xref="taxon:426714"
misc_feature 1..1167
/note="derived from Nicotiana tabacum plastid sequence in
GenBank Accession Number Z00044; plastid sequence targeting
insertions into the trnV-rps12 intergenic region in pPRV
vectors; described in Nucleic Acids Research (1994)
22:3819-3824"
misc_feature 1188..1244
/note="multiple cloning site; includes HindIII, SphI, PstI,
SalI, XbaI, BamHI, SmaI, KpnI, SacI, EcoRI"
misc_feature 1263..1477
/label=Streptomyces phage phiC31 attP attachment sequence
/note="Streptomyces phage phiC31 attP attachment sequence"
CDS complement(1287..1298)
/codon_start=1
/product="Factor Xa recognition and cleavage site"
/label=Factor Xa site
/translation="IEGR"
protein_bind 1369..1468
/label=phage phi-C31 attP
/bound_moiety="phage phi-C31 integrase"
/note="attachment site of phage phi-C31"
regulatory 1485..1631
/regulatory_class="promoter"
/note="derived from tobacco plastid psbA promoter in
GenBank Accession Number Z00044"
CDS 1632..2423
/codon_start=1
/gene="aadA"
/product="aminoglycoside 3 adenyltransferase"
/label=aadA
/note="confers streptomycin and spectinomycin resistance to
bacteria, plant cells and plastids; derived from Shigella
flexneri AAD in GenBank Accession number X03886"
/protein_id="ABN72555.1"
/translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
gene 1632..2423
/gene="aadA"
/label=aadA
3UTR 2438..2626
/note="derived from Nicotiana tabacum psbA in GenBank
Accession Number Z00044"
misc_feature 2645..2698
/label=Streptomyces phage phiC31 attB attachment sequence
/note="Streptomyces phage phiC31 attB attachment sequence"
protein_bind 2657..2690
/label=attB
/bound_moiety="phage phi-C31 integrase"
/note="minimal attB site for the phi-C31 integrase (Groth
et al., 2000)"
misc_feature 2731..4520
/note="derived from Nicotiana tabacum plastid sequence in
GenBank Accession Number Z00044; plastid sequence targeting
insertions into the trnV-rps12 intergenic region in pPRV
vectors; described in Nucleic Acids Research (1994)
22:3819-3824"