LOCUS       Exported               12966 bp ds-DNA     circular SYN 18-DEC-2018
DEFINITION  Cloning vector pPLEX-5001, complete sequence.
ACCESSION   AY225217
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 12966)
  AUTHORS   Schunmann PHD., Surin B, Waterhouse PM.
  TITLE     A suite of novel promoters and terminators for plant biotechnology. 
            II. The pPLEX series for use in monocots
  JOURNAL   Funct. Plant Biol. 30, 453-460 (2003)
REFERENCE   2  (bases 1 to 12966)
  AUTHORS   Schunmann PHD.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2003) CSIRO Plant Industry, GPO Box 1600, 
            Canberra, ACT 2617, Australia
REFERENCE   3  (bases 1 to 12966)
  AUTHORS   .
  TITLE     Direct Submission
FEATURES             Location/Qualifiers
     source          1..12966
                     /organism="Cloning vector pPLEX-5001"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:220614"
     regulatory      21..565
                     /regulatory_class="promoter"
                     /note="S4 promoter derived from subterranean clover stunt 
                     virus DNA segment 4"
     misc_feature    566..613
                     /note="multiple cloning site; MCS"
     regulatory      614..1507
                     /regulatory_class="terminator"
                     /note="Me1 terminator derived from Flavaria bidentis NADP 
                     malic gene"
     regulatory      1568..2009
                     /regulatory_class="promoter"
                     /note="CaMV 35S promoter from pIG121Hm"
     promoter        1656..2000
                     /label=CaMV 35S promoter
                     /note="strong constitutive promoter from cauliflower mosaic
                     virus"
     CDS             join(2010..2342,2533..3225)
                     /codon_start=1
                     /product="hygromycin"
                     /label=hygromycin
                     /note="HPT"
                     /protein_id="AAP23170.1"
                     /translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRG
                     YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
                     ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
                     TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF
                     GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG
                     NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK
                     E"
     intron          2343..2532
                     /note="modified CAT-1"
     intron          2349..2538
                     /label=cat1 intron
                     /note="castor bean catalase intron, modified"
     regulatory      3250..3526
                     /regulatory_class="terminator"
                     /note="NOS terminator"
     terminator      3266..3518
                     /label=NOS terminator
                     /note="nopaline synthase terminator and poly(A) signal"
     promoter        complement(3588..3771)
                     /function="NOS promoter"
                     /label=NOS promoter
                     /note="nopaline synthase promoter"
     promoter        complement(3624..3803)
                     /label=NOS promoter
                     /note="nopaline synthase promoter"
     misc_feature    3810..4431
                     /label=RB (right border)
                     /note="RB (right border)"
     misc_feature    3927..3951
                     /label=RB T-DNA repeat
                     /note="right border repeat from nopaline C58 T-DNA"
     rep_origin      4453..5067
                     /label=oriV
                     /note="origin of replication for the bacterial F plasmid"
     rep_origin      4544..5075
                     /label=oriV
                     /note="incP origin of replication"
     CDS             complement(5750..6538)
                     /codon_start=1
                     /product="spectinomycin resistant protein"
                     /label=spectinomycin resistant protein
                     /protein_id="AAP23172.1"
                     /translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
                     SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
                     RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
                     EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
                     VILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK"
     rep_origin      7635..8223
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(9583..10731)
                     /codon_start=1
                     /product="TrfA"
                     /label=TrfA
                     /protein_id="AAP23171.1"
                     /translation="MNRTFDRKAYRQELIDAGFSAEDAETIASRTVMRAPRETFQSVGS
                     MVQQATAKIERDSVQLAPPALPAPSAAVERSRRLEQEAAGLAKSMTIDTRGTMTTKKRK
                     TAGEDLAKQVSEAKQAALLKHTKQQIKEMQLSLFDIAPWPDTMRAMPNDTARSALFTTR
                     NKKIPREALQNKVIFHVNKDVKITYTGVELRADDDELVWQQVLEYAKRTPIGEPITFTF
                     YELCQDLGWSINGRYYTKAEECLSRLQATAMGFTSDRVGHLESVSLLHRFRVLDRGKKT
                     SRCQVLIDEEIVVLFAGDHYTKFIWEKYRKLSPTARRMFDYFSSHREPYPLKLETFRLM
                     CGSDSTRVKKWREQVGEACEELRGSGLVEHAWVNDDLVHCKR"
     mobile_element  11356..12123
                     /mobile_element_type="insertion sequence:IS1"
                     /note="prokaryotic transposable element"
     oriT            12183..12292
                     /note="incP origin of transfer"
     misc_feature    12432..12923
                     /label=LB (left border)
                     /note="LB (left border)"
     misc_feature    12847..12871
                     /label=LB T-DNA repeat
                     /note="left border repeat from nopaline C58 T-DNA"