LOCUS Exported 6372 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pPK115, complete sequence.
ACCESSION AF117643
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6372)
AUTHORS Coy DL, Hancock WO, Wagenbach M, Howard J.
TITLE Kinesins tail domain is an inhibitory regulator of the motor domain
JOURNAL Nat. Cell Biol. 1 (5), 288-292 (1999)
PUBMED 10559941
REFERENCE 2 (bases 1 to 6372)
AUTHORS Coy DL, Wagenbach M, Howard J.
TITLE Direct Submission
JOURNAL Submitted (30-DEC-1998) Department of Physiology and Biophysics,
University of Washington, Campus Box 357290, Seattle, WA 98195-7290,
USA
REFERENCE 3 (bases 1 to 6372)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6372
/organism="Expression vector pPK115"
/mol_type="other DNA"
/note="derived from Expression vector pPK113 presented in
GenBank Accession Number AF053733"
/db_xref="taxon:91184"
rep_origin 12..467
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 494..598
/gene="bla"
/label=AmpR promoter
CDS 599..1459
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin resistance marker"
/protein_id="AAD29959.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 599..1459
/gene="bla"
/label=bla
rep_origin 1630..2218
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 2404..2546
/label=bom
/note="basis of mobility region from pBR322"
CDS complement(2648..2839)
/codon_start=1
/gene="rop"
/product="Rop protein, which maintains plasmids at low copy
number"
/label=rop
/translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHA
DELYRSCLARFGDDGENL"
promoter 3348..3366
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
RBS 3398..3420
/note="efficient ribosome binding site from bacteriophage
T7 gene 10 (Olins and Rangwala, 1989)"
CDS 3428..6196
/codon_start=1
/product="kinesin delta 560-624"
/label=kinesin delta 560-624
/note="chimera of mutated Drosophila melanogaster kinesin
heavy chain C-terminal region and histidine tag"
/protein_id="AAD29958.1"
/translation="MSAEREIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENC
ISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEG
VIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVH
EDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQE
NLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKT
HIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVN
EELTAEEWKRRYEKEKEKNARLKGKVEKLEIELARWRAGETVKAEEQINMEDLMEASTP
NLEVEAAQTAAAEAALAAQRTALANMSASVAVNEQARLATECERLYQQLDDKDEEINQQ
SQYAEQLKEQVMEQEELIANARREYETLQSEMARIQQENESAKEEVKEVLQALEELTVN
YDQKSQEIDNKNKDIDALNEELQQKQSVFNAASTELQQLKDMAKNIAQRCSNMETQQAD
SNKKISEYEKDLGEYRLLISQHEARMKSLQESMREAENKKRTLEEQIDSLREECAKLKA
AEHVSAVNAEEKQRAEELRSMFDSQMDELREAHTRQVSELRDEIAAKQHEMDEMKDVHQ
KLLLAHQQMTADYEKVRQEDAEKSSELQNIILTNERREQARKDLKGLEDTVAKELQTLH
NLRKLFVQDLQQRIRKNVVNEESEEDGGSLAQKQKISFLENNLDQLTKVHKQLVRDNAD
LRCELPKLEKRLRCTMERVKALETALKEAKEGAMRDRKRYQYEVDRIKEAVRQKHLGRR
GPQAQIAKPIRSGQGAIAIRGGGAVGGPSPLAQVNPVNSLVPRGSHHHHHH"
RBS 4939..4947
/label=Shine-Dalgarno sequence
/note="full consensus sequence for ribosome-binding sites
upstream of start codons in E. coli; complementary to a
region in the 3 end of the 16S rRNA (Chen et al., 1994)"
CDS 6158..6175
/codon_start=1
/product="thrombin recognition and cleavage site"
/label=thrombin site
/translation="LVPRGS"
CDS 6176..6193
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
CDS 6216..6233
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
terminator 6300..6347
/label=T7 terminator
/note="transcription terminator for bacteriophage T7 RNA
polymerase"
LOCUS Exported 6372 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pPK115, complete sequence.
ACCESSION AF117643
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6372)
AUTHORS Coy DL, Hancock WO, Wagenbach M, Howard J.
TITLE Kinesins tail domain is an inhibitory regulator of the motor domain
JOURNAL Nat. Cell Biol. 1 (5), 288-292 (1999)
PUBMED 10559941
REFERENCE 2 (bases 1 to 6372)
AUTHORS Coy DL, Wagenbach M, Howard J.
TITLE Direct Submission
JOURNAL Submitted (30-DEC-1998) Department of Physiology and Biophysics,
University of Washington, Campus Box 357290, Seattle, WA 98195-7290,
USA
REFERENCE 3 (bases 1 to 6372)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6372
/organism="Expression vector pPK115"
/mol_type="other DNA"
/note="derived from Expression vector pPK113 presented in
GenBank Accession Number AF053733"
/db_xref="taxon:91184"
rep_origin 12..467
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 494..598
/gene="bla"
/label=AmpR promoter
CDS 599..1459
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin resistance marker"
/protein_id="AAD29959.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 599..1459
/gene="bla"
/label=bla
rep_origin 1630..2218
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 2404..2546
/label=bom
/note="basis of mobility region from pBR322"
CDS complement(2648..2839)
/codon_start=1
/gene="rop"
/product="Rop protein, which maintains plasmids at low copy
number"
/label=rop
/translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHA
DELYRSCLARFGDDGENL"
promoter 3348..3366
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
RBS 3398..3420
/note="efficient ribosome binding site from bacteriophage
T7 gene 10 (Olins and Rangwala, 1989)"
CDS 3428..6196
/codon_start=1
/product="kinesin delta 560-624"
/label=kinesin delta 560-624
/note="chimera of mutated Drosophila melanogaster kinesin
heavy chain C-terminal region and histidine tag"
/protein_id="AAD29958.1"
/translation="MSAEREIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENC
ISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEG
VIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVH
EDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQE
NLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKT
HIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVN
EELTAEEWKRRYEKEKEKNARLKGKVEKLEIELARWRAGETVKAEEQINMEDLMEASTP
NLEVEAAQTAAAEAALAAQRTALANMSASVAVNEQARLATECERLYQQLDDKDEEINQQ
SQYAEQLKEQVMEQEELIANARREYETLQSEMARIQQENESAKEEVKEVLQALEELTVN
YDQKSQEIDNKNKDIDALNEELQQKQSVFNAASTELQQLKDMAKNIAQRCSNMETQQAD
SNKKISEYEKDLGEYRLLISQHEARMKSLQESMREAENKKRTLEEQIDSLREECAKLKA
AEHVSAVNAEEKQRAEELRSMFDSQMDELREAHTRQVSELRDEIAAKQHEMDEMKDVHQ
KLLLAHQQMTADYEKVRQEDAEKSSELQNIILTNERREQARKDLKGLEDTVAKELQTLH
NLRKLFVQDLQQRIRKNVVNEESEEDGGSLAQKQKISFLENNLDQLTKVHKQLVRDNAD
LRCELPKLEKRLRCTMERVKALETALKEAKEGAMRDRKRYQYEVDRIKEAVRQKHLGRR
GPQAQIAKPIRSGQGAIAIRGGGAVGGPSPLAQVNPVNSLVPRGSHHHHHH"
RBS 4939..4947
/label=Shine-Dalgarno sequence
/note="full consensus sequence for ribosome-binding sites
upstream of start codons in E. coli; complementary to a
region in the 3 end of the 16S rRNA (Chen et al., 1994)"
CDS 6158..6175
/codon_start=1
/product="thrombin recognition and cleavage site"
/label=thrombin site
/translation="LVPRGS"
CDS 6176..6193
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
CDS 6216..6233
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
terminator 6300..6347
/label=T7 terminator
/note="transcription terminator for bacteriophage T7 RNA
polymerase"