LOCUS Exported 5173 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transformation vector pPIBGT8, complete sequence.
ACCESSION EU196041
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5173)
AUTHORS Oertel W, Weissgerber A.
TITLE Transformation of Ulva mutabilis Foyn with plasmids integrating into
the chromosome
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5173)
AUTHORS Oertel W, Weissgerber A.
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2007) Biochemistry, Genetics and Microbiology,
Division of Genetics, University of Regensburg, Universitaetsstr.
31, Regensburg, Bavaria 93053, Germany
REFERENCE 3 (bases 1 to 5173)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5173
/organism="Transformation vector pPIBGT8"
/mol_type="other DNA"
/label=transformation vector for Ulva mutabilis
/note="transformation vector for Ulva mutabilis"
/db_xref="taxon:492500"
regulatory 1..546
/regulatory_class="promoter"
/note="Ulva RbcS promoter"
CDS join(547..554,1052..2129)
/codon_start=1
/gene="ble/GFP fusion"
/product="bleomycin resistance protein/GFP fusion protein"
/label=ble/GFP fusion
/note="Streptoalloteichus hindustanus ble gene fused with
Aequoria victoria GFP gene (synthetic Ulva codon adapted
construct)"
/protein_id="ABY60800.1"
/translation="MAKITSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDD
VTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGR
EFALRDPAGNCVHFVAEEQVPKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYG
KLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIF
FKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQK
NGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSIQSALSKDPNEKRDH
MVLLEFVTAAGITHGMDELYK"
gene 547..2129
/gene="ble/GFP fusion"
/label=ble/GFP fusion
intron 555..1051
/gene="ble/GFP fusion"
/number=1
/note="derived from Ulva RbcS; enhancer"
misc_feature 1528..5173
/note="derived from cloning vector pUC8 with minor
modifications"
regulatory 2139..2527
/regulatory_class="terminator"
/note="Ulva RbcS terminator"
primer_bind complement(2536..2552)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 3026..3130
/gene="bla"
/label=AmpR promoter
CDS 3131..3991
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 4162..4750
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 5038..5059
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 5074..5104
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5112..5128
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 5136..5152
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 5173 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transformation vector pPIBGT8, complete sequence.
ACCESSION EU196041
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5173)
AUTHORS Oertel W, Weissgerber A.
TITLE Transformation of Ulva mutabilis Foyn with plasmids integrating into
the chromosome
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5173)
AUTHORS Oertel W, Weissgerber A.
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2007) Biochemistry, Genetics and Microbiology,
Division of Genetics, University of Regensburg, Universitaetsstr.
31, Regensburg, Bavaria 93053, Germany
REFERENCE 3 (bases 1 to 5173)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5173
/organism="Transformation vector pPIBGT8"
/mol_type="other DNA"
/label=transformation vector for Ulva mutabilis
/note="transformation vector for Ulva mutabilis"
/db_xref="taxon:492500"
regulatory 1..546
/regulatory_class="promoter"
/note="Ulva RbcS promoter"
CDS join(547..554,1052..2129)
/codon_start=1
/gene="ble/GFP fusion"
/product="bleomycin resistance protein/GFP fusion protein"
/label=ble/GFP fusion
/note="Streptoalloteichus hindustanus ble gene fused with
Aequoria victoria GFP gene (synthetic Ulva codon adapted
construct)"
/protein_id="ABY60800.1"
/translation="MAKITSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDD
VTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGR
EFALRDPAGNCVHFVAEEQVPKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYG
KLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIF
FKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQK
NGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSIQSALSKDPNEKRDH
MVLLEFVTAAGITHGMDELYK"
gene 547..2129
/gene="ble/GFP fusion"
/label=ble/GFP fusion
intron 555..1051
/gene="ble/GFP fusion"
/number=1
/note="derived from Ulva RbcS; enhancer"
misc_feature 1528..5173
/note="derived from cloning vector pUC8 with minor
modifications"
regulatory 2139..2527
/regulatory_class="terminator"
/note="Ulva RbcS terminator"
primer_bind complement(2536..2552)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 3026..3130
/gene="bla"
/label=AmpR promoter
CDS 3131..3991
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 4162..4750
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 5038..5059
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 5074..5104
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5112..5128
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 5136..5152
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"