LOCUS Exported 3975 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transformation vector pPBT 1.5, complete sequence.
ACCESSION EU200351
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3975)
AUTHORS Oertel W, Weissgerber A.
TITLE Transformation of Ulva mutabilis Foyn with plasmids integrating into
the chromosome
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3975)
AUTHORS Oertel W, Weissgerber A.
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2007) Biochemistry, Genetics and Microbiology,
Division of Genetics, University of Regensburg, Universitaetsstr.
31, Regensburg, Bavaria 93053, Germany
REFERENCE 3 (bases 1 to 3975)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3975
/organism="Transformation vector pPBT 1.5"
/lab_host="Ulva mutabilis"
/mol_type="other DNA"
/db_xref="taxon:485337"
regulatory 1..546
/regulatory_class="promoter"
/note="Ulva mutabilis RbcS promoter"
CDS 547..921
/codon_start=1
/gene="ble"
/product="bleomycin resistance protein"
/label=ble
/note="derived from Streptoalloteichus hindustanus, adapted
to Chlamydomonas reinhardtii and Ulva mutabilis codon
usage"
/protein_id="ABX60150.1"
/translation="MAKITSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDD
VTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGR
EFALRDPAGNCVHFVAEEQD"
gene 547..921
/gene="ble"
/label=ble
regulatory 922..1310
/regulatory_class="terminator"
/note="Ulva mutabilis RbcS terminator"
misc_feature 1311..3975
/note="derived from cloning vector pUC8, with minor
modifications"
primer_bind complement(1338..1354)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 1828..1932
/gene="bla"
/label=AmpR promoter
CDS 1933..2793
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 2964..3552
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3840..3861
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 3876..3906
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3914..3930
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 3938..3954
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 3975 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transformation vector pPBT 1.5, complete sequence.
ACCESSION EU200351
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3975)
AUTHORS Oertel W, Weissgerber A.
TITLE Transformation of Ulva mutabilis Foyn with plasmids integrating into
the chromosome
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3975)
AUTHORS Oertel W, Weissgerber A.
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2007) Biochemistry, Genetics and Microbiology,
Division of Genetics, University of Regensburg, Universitaetsstr.
31, Regensburg, Bavaria 93053, Germany
REFERENCE 3 (bases 1 to 3975)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3975
/organism="Transformation vector pPBT 1.5"
/lab_host="Ulva mutabilis"
/mol_type="other DNA"
/db_xref="taxon:485337"
regulatory 1..546
/regulatory_class="promoter"
/note="Ulva mutabilis RbcS promoter"
CDS 547..921
/codon_start=1
/gene="ble"
/product="bleomycin resistance protein"
/label=ble
/note="derived from Streptoalloteichus hindustanus, adapted
to Chlamydomonas reinhardtii and Ulva mutabilis codon
usage"
/protein_id="ABX60150.1"
/translation="MAKITSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDD
VTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGR
EFALRDPAGNCVHFVAEEQD"
gene 547..921
/gene="ble"
/label=ble
regulatory 922..1310
/regulatory_class="terminator"
/note="Ulva mutabilis RbcS terminator"
misc_feature 1311..3975
/note="derived from cloning vector pUC8, with minor
modifications"
primer_bind complement(1338..1354)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 1828..1932
/gene="bla"
/label=AmpR promoter
CDS 1933..2793
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 2964..3552
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3840..3861
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 3876..3906
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3914..3930
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 3938..3954
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"