LOCUS Exported 7740 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Reporter vector pP3CG, complete sequence.
ACCESSION HQ873320
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7740)
AUTHORS Blazso P.
TITLE pP3CG, 3.6kb mouse cyclin C promoter - hrGFP reporter construction
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 7740)
AUTHORS Blazso P.
TITLE Direct Submission
JOURNAL Submitted (07-JAN-2011) Institute of Genetics, Biological Research
Center, Hungarian Academy of Sciences, Temesvari krt. 62, Szeged
H6726, Hungary
REFERENCE 3 (bases 1 to 7740)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7740
/organism="Reporter vector pP3CG"
/mol_type="other DNA"
/db_xref="taxon:1055507"
promoter 25..129
/gene="bla"
/label=AmpR promoter
CDS 130..990
/codon_start=1
/product="b-lactamase"
/label=b-lactamase
/note="ampicillin resistance"
/protein_id="AEK26870.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 1138..1805
/label=pUC replication origin
/note="pUC replication origin"
rep_origin 1161..1749
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2037..2058
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2073..2103
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2111..2127
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2135..2151
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 2172..2190
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
regulatory 2221..5801
/regulatory_class="promoter"
/note="3.6 kb promoter fragment of mouse cyclin C gene"
CDS 5810..6529
/codon_start=1
/product="hrGFP"
/label=hrGFP
/note="humanized Renilla green fluorescent protein"
/protein_id="AEK26869.1"
/translation="MVSKQILKNTGLQEIMSFKVNLEGVVNNHVFTMEGCGKGNILFGN
QLVQIRVTKGAPLPFAFDILSPAFQYGNRTFTKYPEDISDFFIQSFPAGFVYERTLRYE
DGGLVEIRSDINLIEEMFVYRVEYKGRNFPNDGPVMKKTITGLQPSFEVVYMNDGVLVG
QVILVYRLNSGKFYSCHMRTLMKSKGVVKDFPEYHFIQHRLEKTYVEDGGFVEQHETAI
AQLTSLGKPLGSLHEWV"
primer_bind complement(6553..6569)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(6608..6626)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 6639..7022
/label=SV40 polyA signal
/note="SV40 polyA signal"
polyA_signal 6900..7021
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
primer_bind complement(7056..7072)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(7098..7116)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(7126..7142)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 7284..7739
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
rep_origin 7301..7607
/label=f1 (+) replication origin
/note="f1 (+) replication origin"
LOCUS Exported 7740 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Reporter vector pP3CG, complete sequence.
ACCESSION HQ873320
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7740)
AUTHORS Blazso P.
TITLE pP3CG, 3.6kb mouse cyclin C promoter - hrGFP reporter construction
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 7740)
AUTHORS Blazso P.
TITLE Direct Submission
JOURNAL Submitted (07-JAN-2011) Institute of Genetics, Biological Research
Center, Hungarian Academy of Sciences, Temesvari krt. 62, Szeged
H6726, Hungary
REFERENCE 3 (bases 1 to 7740)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7740
/organism="Reporter vector pP3CG"
/mol_type="other DNA"
/db_xref="taxon:1055507"
promoter 25..129
/gene="bla"
/label=AmpR promoter
CDS 130..990
/codon_start=1
/product="b-lactamase"
/label=b-lactamase
/note="ampicillin resistance"
/protein_id="AEK26870.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 1138..1805
/label=pUC replication origin
/note="pUC replication origin"
rep_origin 1161..1749
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2037..2058
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2073..2103
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2111..2127
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2135..2151
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 2172..2190
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
regulatory 2221..5801
/regulatory_class="promoter"
/note="3.6 kb promoter fragment of mouse cyclin C gene"
CDS 5810..6529
/codon_start=1
/product="hrGFP"
/label=hrGFP
/note="humanized Renilla green fluorescent protein"
/protein_id="AEK26869.1"
/translation="MVSKQILKNTGLQEIMSFKVNLEGVVNNHVFTMEGCGKGNILFGN
QLVQIRVTKGAPLPFAFDILSPAFQYGNRTFTKYPEDISDFFIQSFPAGFVYERTLRYE
DGGLVEIRSDINLIEEMFVYRVEYKGRNFPNDGPVMKKTITGLQPSFEVVYMNDGVLVG
QVILVYRLNSGKFYSCHMRTLMKSKGVVKDFPEYHFIQHRLEKTYVEDGGFVEQHETAI
AQLTSLGKPLGSLHEWV"
primer_bind complement(6553..6569)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(6608..6626)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 6639..7022
/label=SV40 polyA signal
/note="SV40 polyA signal"
polyA_signal 6900..7021
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
primer_bind complement(7056..7072)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(7098..7116)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(7126..7142)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 7284..7739
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
rep_origin 7301..7607
/label=f1 (+) replication origin
/note="f1 (+) replication origin"