LOCUS       Exported                5594 bp ds-DNA     circular SYN 18-DEC-2018
DEFINITION  Expression vector pOPING, complete sequence.
ACCESSION   EF372394
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 5594)
  AUTHORS   Berrow NS, Alderton D, Sainsbury S, Nettleship J, Assenberg R, 
            Rahman N, Stuart DI, Owens RJ.
  TITLE     A versatile ligation-independent cloning method suitable for 
            high-throughput expression screening applications
  JOURNAL   Nucleic Acids Res. 35 (6), E45 (2007)
  PUBMED    17317681
REFERENCE   2  (bases 1 to 5594)
  AUTHORS   Berrow NS.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2007) Oxford Protein Production Facility, Oxford 
            University, Roosevelt Drive, Oxford, Oxfordshire OX3 7BN, U.K.
REFERENCE   3  (bases 1 to 5594)
  AUTHORS   .
  TITLE     Direct Submission
FEATURES             Location/Qualifiers
     source          1..5594
                     /organism="Expression vector pOPING"
                     /mol_type="other DNA"
                     /label=based on pTriEx2 backbone
                     /note="based on pTriEx2 backbone"
                     /db_xref="taxon:425267"
     misc_feature    45..1011
                     /label=lef2/ORF603
                     /note="lef2/ORF603"
     misc_recomb     181..1008
                     /label=baculovirus recombination region (lef2/ORF603)
                     /note="contains ORF603 and part of lef2"
     CDS             181..305
                     /codon_start=3
                     /product="baculovirus late expression factor 2"
                     /label=lef2
                     /translation="HLLIKSQDVYKPPNCQKMKTVDKLCPFAGNCKGLNPICNY"
     CDS             complement(343..948)
                     /codon_start=1
                     /product="baculovirus ORF603 protein"
                     /label=ORF603
                     /translation="MAVIFNNKQLLADNSIEKGGELFLFNGSYNILESYVNPVLLKNGV
                     IELEEAAYYAGNILYKTDDPKFIDYINLIIKATHSEELPENSTVVNYRKTMRSGTIHPI
                     KKDIYIYDNKKFTLYDRYIYGYDNNYVNFYEEKNEKEKEYEEEDDKASSLCENKIILSQ
                     INCESFENDFKYYLSDYNYAFSIIDNTTNVLVAFGLYR"
     regulatory      1079..1443
                     /regulatory_class="enhancer"
                     /note="CMV enhancer"
     enhancer        1140..1443
                     /label=CMV enhancer
                     /note="human cytomegalovirus immediate early enhancer"
     regulatory      1449..1726
                     /regulatory_class="promoter"
                     /note="chicken beta-actin promoter"
     promoter        1449..1726
                     /label=chicken beta-actin promoter
     promoter        2150..2168
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"
     regulatory      2150..2166
                     /regulatory_class="promoter"
                     /note="T7 promoter"
     protein_bind    2169..2193
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     misc_feature    2171..2191
                     /label=lac operator
                     /note="lac operator"
     misc_feature    2205..2318
                     /label=p10 promoter and 5 UTR
                     /note="p10 promoter and 5 UTR"
     promoter        2209..2318
                     /label=p10 promoter
                     /note="baculovirus promoter for expression in insect cells"
     regulatory      2333..2425
                     /regulatory_class="other"
                     /note="secretion leader peptide (mu -phosphatase)"
     misc_feature    2409..2423
                     /label=5 in-fusion site (after KpnI digest)
                     /note="5 in-fusion site (after KpnI digest)"
     misc_feature    2429..2767
                     /label=lacZ promoter and lacZ alpha peptide
                     /note="lacZ promoter and lacZ alpha peptide"
     protein_bind    2469..2490
                     /label=CAP binding site
                     /bound_moiety="E. coli catabolite activator protein"
                     /note="CAP binding activates transcription in the presence 
                     of cAMP."
     promoter        2505..2535
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    2543..2559
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     primer_bind     2567..2583
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     CDS             2579..2752
                     /codon_start=1
                     /gene="lacZ fragment"
                     /product="LacZ-alpha fragment of beta-galactosidase"
                     /label=lacZ-alpha
                     /translation="MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEART
                     DRPSQQLRSLNGE"
     primer_bind     complement(2599..2615)
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     misc_feature    2779..2799
                     /label=C-terminal KHHHHHH tag
                     /note="C-terminal KHHHHHH tag"
     misc_feature    2779..2793
                     /label=3 in-fusion site (after PmeI digest)
                     /note="3 in-fusion site (after PmeI digest)"
     CDS             2782..2799
                     /codon_start=1
                     /product="6xHis affinity tag"
                     /label=6xHis
                     /translation="HHHHHH"
     regulatory      2851..3093
                     /regulatory_class="polyA_signal_sequence"
     polyA_site      2954..3009
                     /label=-beta-globin poly(A) signal
                     /note="rabbit beta-globin polyadenylation signal"
     regulatory      3097..3144
                     /regulatory_class="terminator"
                     /note="T7 terminator"
     terminator      3097..3144
                     /label=T7 terminator
                     /note="transcription terminator for bacteriophage T7 RNA 
                     polymerase"
     misc_feature    3157..3862
                     /label=ORF1629
                     /note="ORF1629"
     misc_recomb     3157..3862
                     /label=baculovirus recombination region (ORF1629)
                     /note="contains part of ORF1629"
     3UTR           3245..3617
                     /label=polyhedrin 3 UTR
                     /note="3 UTR from the Autographa californica 
                     nucleopolyhedrovirus polyhedrin gene (Suzuki et al., 2006)"
     CDS             complement(3274..3862)
                     /codon_start=2
                     /product="baculovirus capsid-associated protein"
                     /label=ORF1629
                     /note="required for viral replication"
                     /translation="IPKSSTTNLIADVLADTINRRRVAMAKSSSEATSNDEGWDDDDNR
                     PNKANTPDVKYVQALFNVFTSSQLYTNDSDERNTKAHNILNDVEPLLQNKTQTNIDKAR
                     LLLQDLASFVALSENPLDSPAIGSEKQPLFETNRNLFYKSIEDLIFKFRYKDAENHLIF
                     ALTYHPKDYKFNELLKYVQQLSVNQQRTESSA"
     protein_bind    3871..3904
                     /label=loxP
                     /bound_moiety="Cre recombinase"
                     /note="Cre-mediated recombination occurs in the 8-bp core 
                     sequence (GCATACAT)."
     rep_origin      complement(4072..4659)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     rep_origin      4073
                     /label=pUC origin of replication
                     /note="pUC origin of replication"
     CDS             complement(4672..5532)
                     /codon_start=1
                     /gene="ampR"
                     /product="beta-lactamase"
                     /label=ampR
                     /protein_id="ABN80179.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     gene            complement(4672..5532)
                     /gene="ampR"
                     /label=ampR