Liu G, Ou HY, Wang T, Li L, Tan H, Zhou X, Rajakumar K, Deng Z, He X.
pOJ260 载体载体图谱
pOJ260 载体载体序列
LOCUS Exported 3469 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pOJ260, complete sequence.
ACCESSION GU270843
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3469)
AUTHORS Liu G, Ou HY, Wang T, Li L, Tan H, Zhou X, Rajakumar K, Deng Z, He
X.
TITLE Cleavage of phosphorothioated DNA and methylated DNA by the type IV
restriction endonuclease ScoMcrA
JOURNAL PLoS Genet. 6 (12), E1001253 (2010)
PUBMED 21203499
REFERENCE 2 (bases 1 to 3469)
AUTHORS Liu G, He XY, Deng ZX.
TITLE Direct Submission
JOURNAL Submitted (04-DEC-2009) School of Life Science & Biotechnology,
Shanghai Jiaotong University, 1954 Huashan Road, Shanghai 200030,
P.R. China
REFERENCE 3 (bases 1 to 3469)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3469
/organism="Cloning vector pOJ260"
/mol_type="other DNA"
/label=suicide vector
/note="suicide vector"
/db_xref="taxon:706444"
CDS complement(163..507)
/codon_start=1
/gene="lacZa"
/product="lacZ alpha peptide"
/label=lacZa
/protein_id="ADB65775.1"
/translation="MITNSISRAAADPLESTCSPSLALAVVLQRRDWENPGVTQLNRLA
AHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCGISHRINSPMSSTSGIG
SAADAKCRST"
gene complement(163..507)
/gene="lacZa"
/label=lacZa
primer_bind 423..439
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(508..524)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 532..548
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(556..586)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 601..622
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(910..1498)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS 1702..2505
/codon_start=1
/gene="aac(3)IV"
/product="apramycin resistance protein"
/label=aac(3)IV
/protein_id="ADB65776.1"
/translation="MSSAVECNVVQYEWRKAELIGQLLNLGVTPGGVLLVHSSFRSVRP
LEDGPLGLIEALRAALGPGGTLVMPSWSGLDDEPFDPATSPVTPDLGVVSDTFWRLPNV
KRSAHPFAFAAAGPQAEQIISDPLPLPPHSPASPVARVHELDGQVLLLGVGHDANTTLH
LAELMAKVPYGVPRHCTILQDGKLVRVDYLENDHCCERFALADRWLKEKSLQKEGPVGH
AFARLIRSRDIVATALGQLGRDPLIFLHPPEAGCEECDAARQSIG"
gene 1702..2505
/gene="aac(3)IV"
/label=aac(3)IV
CDS 1702..2502
/codon_start=1
/gene="aac(3)IV"
/product="aminoglycoside 3-N-acetyltransferase type IV
"
/label=ApmR
/note="confers resistance to apramycin (Paget and Davies,
1996)"
/translation="MSSAVECNVVQYEWRKAELIGQLLNLGVTPGGVLLVHSSFRSVRP
LEDGPLGLIEALRAALGPGGTLVMPSWSGLDDEPFDPATSPVTPDLGVVSDTFWRLPNV
KRSAHPFAFAAAGPQAEQIISDPLPLPPHSPASPVARVHELDGQVLLLGVGHDANTTLH
LAELMAKVPYGVPRHCTILQDGKLVRVDYLENDHCCERFALADRWLKEKSLQKEGPVGH
AFARLIRSRDIVATALGQLGRDPLIFLHPPEAGCEECDAARQSIG"
rep_origin 2945..3056
/label=RP4 origin of single-stranded DNA transfer
/note="RP4 origin of single-stranded DNA transfer"
oriT 2947..3056
/note="incP origin of transfer"
Liu G, Ou HY, Wang T, Li L, Tan H, Zhou X, Rajakumar K, Deng Z, He X.
pOJ260 载体载体图谱
pOJ260 载体载体序列
LOCUS Exported 3469 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pOJ260, complete sequence.
ACCESSION GU270843
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3469)
AUTHORS Liu G, Ou HY, Wang T, Li L, Tan H, Zhou X, Rajakumar K, Deng Z, He
X.
TITLE Cleavage of phosphorothioated DNA and methylated DNA by the type IV
restriction endonuclease ScoMcrA
JOURNAL PLoS Genet. 6 (12), E1001253 (2010)
PUBMED 21203499
REFERENCE 2 (bases 1 to 3469)
AUTHORS Liu G, He XY, Deng ZX.
TITLE Direct Submission
JOURNAL Submitted (04-DEC-2009) School of Life Science & Biotechnology,
Shanghai Jiaotong University, 1954 Huashan Road, Shanghai 200030,
P.R. China
REFERENCE 3 (bases 1 to 3469)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3469
/organism="Cloning vector pOJ260"
/mol_type="other DNA"
/label=suicide vector
/note="suicide vector"
/db_xref="taxon:706444"
CDS complement(163..507)
/codon_start=1
/gene="lacZa"
/product="lacZ alpha peptide"
/label=lacZa
/protein_id="ADB65775.1"
/translation="MITNSISRAAADPLESTCSPSLALAVVLQRRDWENPGVTQLNRLA
AHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCGISHRINSPMSSTSGIG
SAADAKCRST"
gene complement(163..507)
/gene="lacZa"
/label=lacZa
primer_bind 423..439
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(508..524)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 532..548
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(556..586)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 601..622
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(910..1498)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS 1702..2505
/codon_start=1
/gene="aac(3)IV"
/product="apramycin resistance protein"
/label=aac(3)IV
/protein_id="ADB65776.1"
/translation="MSSAVECNVVQYEWRKAELIGQLLNLGVTPGGVLLVHSSFRSVRP
LEDGPLGLIEALRAALGPGGTLVMPSWSGLDDEPFDPATSPVTPDLGVVSDTFWRLPNV
KRSAHPFAFAAAGPQAEQIISDPLPLPPHSPASPVARVHELDGQVLLLGVGHDANTTLH
LAELMAKVPYGVPRHCTILQDGKLVRVDYLENDHCCERFALADRWLKEKSLQKEGPVGH
AFARLIRSRDIVATALGQLGRDPLIFLHPPEAGCEECDAARQSIG"
gene 1702..2505
/gene="aac(3)IV"
/label=aac(3)IV
CDS 1702..2502
/codon_start=1
/gene="aac(3)IV"
/product="aminoglycoside 3-N-acetyltransferase type IV
"
/label=ApmR
/note="confers resistance to apramycin (Paget and Davies,
1996)"
/translation="MSSAVECNVVQYEWRKAELIGQLLNLGVTPGGVLLVHSSFRSVRP
LEDGPLGLIEALRAALGPGGTLVMPSWSGLDDEPFDPATSPVTPDLGVVSDTFWRLPNV
KRSAHPFAFAAAGPQAEQIISDPLPLPPHSPASPVARVHELDGQVLLLGVGHDANTTLH
LAELMAKVPYGVPRHCTILQDGKLVRVDYLENDHCCERFALADRWLKEKSLQKEGPVGH
AFARLIRSRDIVATALGQLGRDPLIFLHPPEAGCEECDAARQSIG"
rep_origin 2945..3056
/label=RP4 origin of single-stranded DNA transfer
/note="RP4 origin of single-stranded DNA transfer"
oriT 2947..3056
/note="incP origin of transfer"