Kamigaki A, Nito K, Hikino K, Goto-Yamada S, Nishimura M, Nakagawa T, Mano S.
pnRGW 载体载体图谱
pnRGW 载体载体序列
LOCUS Exported 6489 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Gateway vector pnRGW DNA, complete sequence.
ACCESSION AB830540
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6489)
AUTHORS Kamigaki A, Nito K, Hikino K, Goto-Yamada S, Nishimura M, Nakagawa
T, Mano S.
TITLE Gateway Vectors for Simultaneous Detection of Multiple
Protein-Protein Interactions in Plant Cells Using Bimolecular
Fluorescence Complementation
JOURNAL PLoS ONE 11 (8), E0160717 (2016)
PUBMED 27490375
REFERENCE 2 (bases 1 to 6489)
AUTHORS Mano S, Nakagawa T.
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2013) Contact:Shoji Mano National Institute for
Basic Biology, Department of Cell Biology; 38 Nishigonaka, Myodaiji,
Okazaki, Aichi 444-8585, Japan
REFERENCE 3 (bases 1 to 6489)
AUTHORS .
TITLE Direct Submission
COMMENT These colnes were obtained at our laboratory.
FEATURES Location/Qualifiers
source 1..6489
/organism="Gateway vector pnRGW"
/mol_type="other DNA"
/db_xref="taxon:1356413"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 143..173
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 181..197
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 205..221
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
regulatory 258..1091
/regulatory_class="promoter"
/note="35S promoter"
promoter 745..1090
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
misc_feature 1111..1605
/label=nmrfp1
/note="nmrfp1"
CDS 1114..1143
/codon_start=1
/product="Myc (human c-Myc proto-oncogene) epitope tag"
/label=Myc
/translation="EQKLISEEDL"
misc_feature complement(1615..1739)
/label=attR1
/note="attR1"
protein_bind 1615..1739
/gene="mutant version of attR"
/label=attR1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
promoter 1776..1806
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
CDS 1860..2519
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/protein_id="BAV44461.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene 1860..2519
/gene="cat"
/label=cat
CDS 2861..3166
/codon_start=1
/gene="ccdB"
/label=ccdB
/protein_id="BAV44462.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
gene 2861..3166
/gene="ccdB"
/label=ccdB
misc_feature 3207..3331
/label=attR2
/note="attR2"
protein_bind complement(3207..3331)
/gene="mutant version of attR"
/label=attR2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
regulatory 3341..3617
/regulatory_class="terminator"
/note="NOS terminator"
terminator 3357..3609
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
primer_bind complement(3618..3634)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 3847..4302
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 4584..4688
/gene="bla"
/label=AmpR promoter
CDS 4689..5549
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="BAV44463.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 4689..5549
/gene="bla"
/label=bla
rep_origin complement(5710..6310)
/direction=LEFT
/label=colE1 ori
/note="colE1 ori"
rep_origin 5720..6308
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
Kamigaki A, Nito K, Hikino K, Goto-Yamada S, Nishimura M, Nakagawa T, Mano S.
pnRGW 载体载体图谱
pnRGW 载体载体序列
LOCUS Exported 6489 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Gateway vector pnRGW DNA, complete sequence.
ACCESSION AB830540
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6489)
AUTHORS Kamigaki A, Nito K, Hikino K, Goto-Yamada S, Nishimura M, Nakagawa
T, Mano S.
TITLE Gateway Vectors for Simultaneous Detection of Multiple
Protein-Protein Interactions in Plant Cells Using Bimolecular
Fluorescence Complementation
JOURNAL PLoS ONE 11 (8), E0160717 (2016)
PUBMED 27490375
REFERENCE 2 (bases 1 to 6489)
AUTHORS Mano S, Nakagawa T.
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2013) Contact:Shoji Mano National Institute for
Basic Biology, Department of Cell Biology; 38 Nishigonaka, Myodaiji,
Okazaki, Aichi 444-8585, Japan
REFERENCE 3 (bases 1 to 6489)
AUTHORS .
TITLE Direct Submission
COMMENT These colnes were obtained at our laboratory.
FEATURES Location/Qualifiers
source 1..6489
/organism="Gateway vector pnRGW"
/mol_type="other DNA"
/db_xref="taxon:1356413"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 143..173
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 181..197
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 205..221
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
regulatory 258..1091
/regulatory_class="promoter"
/note="35S promoter"
promoter 745..1090
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
misc_feature 1111..1605
/label=nmrfp1
/note="nmrfp1"
CDS 1114..1143
/codon_start=1
/product="Myc (human c-Myc proto-oncogene) epitope tag"
/label=Myc
/translation="EQKLISEEDL"
misc_feature complement(1615..1739)
/label=attR1
/note="attR1"
protein_bind 1615..1739
/gene="mutant version of attR"
/label=attR1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
promoter 1776..1806
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
CDS 1860..2519
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/protein_id="BAV44461.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene 1860..2519
/gene="cat"
/label=cat
CDS 2861..3166
/codon_start=1
/gene="ccdB"
/label=ccdB
/protein_id="BAV44462.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
gene 2861..3166
/gene="ccdB"
/label=ccdB
misc_feature 3207..3331
/label=attR2
/note="attR2"
protein_bind complement(3207..3331)
/gene="mutant version of attR"
/label=attR2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
regulatory 3341..3617
/regulatory_class="terminator"
/note="NOS terminator"
terminator 3357..3609
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
primer_bind complement(3618..3634)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 3847..4302
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 4584..4688
/gene="bla"
/label=AmpR promoter
CDS 4689..5549
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="BAV44463.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 4689..5549
/gene="bla"
/label=bla
rep_origin complement(5710..6310)
/direction=LEFT
/label=colE1 ori
/note="colE1 ori"
rep_origin 5720..6308
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"