Yamagishi J, Kojima T, Oyamada Y, Fujimoto K, Hattori H, Nakamura S, Inoue M.
pND50 载体载体图谱
pND50 载体载体序列
LOCUS Exported 3772 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pND50 DNA, complete sequence.
ACCESSION AB206288
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3772)
AUTHORS Yamagishi J, Kojima T, Oyamada Y, Fujimoto K, Hattori H, Nakamura S,
Inoue M.
TITLE Alterations in the DNA topoisomerase IV grlA gene responsible for
quinolone resistance in Staphylococcus aureus
JOURNAL Antimicrob. Agents Chemother. 40 (5), 1157-1163 (1996)
PUBMED 8723458
REFERENCE 2 (bases 1 to 3772)
AUTHORS Inoue R, Kaito C, Tanabe M, Kamura K, Akimitsu N, Sekimizu K.
TITLE Genetic identification of two distinct DNA polymerases, DnaE and
PolC, that are essential for chromosomal DNA replication in
Staphylococcus aureus
JOURNAL Mol. Genet. Genomics 266 (4), 564-571 (2001)
PUBMED 11810227
REFERENCE 3 (bases 1 to 3772)
AUTHORS Matsuo M, Kurokawa K, Nishida S, Li Y, Takimura H, Kaito C, Fukuhara
N, Maki H, Miura K, Murakami K, Sekimizu K.
TITLE Isolation and mutation site determination of the
temperature-sensitive murB mutants of Staphylococcus aureus
JOURNAL FEMS Microbiol. Lett. 222 (1), 107-113 (2003)
PUBMED 12757953
REFERENCE 4 (bases 1 to 3772)
AUTHORS Kurokawa K, Matsuo M, Sekimizu K.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2005) Kenji Kurokawa, The University of Tokyo,
Graduate School of Pharmaceutical Sciences; 7-3-1, Hongo, Bunkyo-ku,
Tokyo 113-0033, Japan (E-mail:kurokawa@mol.f.u-tokyo.ac.jp,
URL:http://www.f.u-tokyo.ac.jp/~hassei/, Tel:81-3-5841-4821,
Fax:81-3-5684-2973)
REFERENCE 5 (bases 1 to 3772)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3772
/organism="Cloning vector pND50"
/mol_type="other DNA"
/note="A shuttle vector between Escherichia coli and
Staphylococcus aureus. Harboring the chloramphenicol acetyl
transferase gene derived from pC194, a Staphylococcal
plasmid replication origin from pUB110, an E. coli plasmid
replication origin from pUC19, and a multi-cloning site
from pUC18."
/db_xref="taxon:316466"
misc_feature 1..66
/label=pUC18-derived sequence
/note="pUC18-derived sequence"
misc_feature 1..57
/label=multi-cloning sites of pUC18
/note="multi-cloning sites of pUC18"
misc_feature 67..908
/label=pUC19-derived sequence
/note="pUC19-derived sequence"
rep_origin 264..852
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature join(909..1327,2171..3772)
/label=pUB110-derived sequence
/note="pUB110-derived sequence"
misc_feature 1328..2170
/label=pC194-derived sequence
/note="pC194-derived sequence"
CDS complement(1427..2077)
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/function="chloramphenicol resistance"
/label=cat
/experiment="experimental evidence, no additional details
recorded"
/protein_id="BAD90928.1"
/translation="MNFNKIDLDNWKRKEIFNHYLNQQTTFSITTEIDISVLYRNIKQE
GYKFYPAFIFLVTRVINSNTAFRTGYNSDGELGYWDKLEPLYTIFDGVSKTFSGIWTPV
KNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSLSIIPWTSFTGFNLNINNNSNYL
LPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELSDRPNDWLL"
gene complement(1427..2077)
/gene="cat"
/label=cat
CDS complement(2356..3360)
/codon_start=1
/gene="repB"
/product="RepB replication protein"
/label=repB
/note="from Enterococcus faecalis plasmid pAM-alpha-1"
/db_xref="GI:22652809"
/protein_id="AAN03827.1"
/translation="MGVSFNIMCPNSSIYSDEKSRVLVDKTKSGKVRPWREKKIANVDY
FELLHILEFKKAERVKDCAEILEYKQNRETGERKLYRVWFCKSRLCPMCNWRRAMKHGI
QSQKVVAEVIKQKPTVRWLFLTLTVKNVYDGEELNKSLSDMAQGFRRMMQYKKINKNLV
GFMRATEVTINNKDNSYNQHMHVLVCVEPTYFKNTENYVNQKQWIQFWKKAMKLDYDPN
VKVQMIRPKNKYKSDIQSAIDETAKYPVKDTDFMTDDEEKNLKRLSDLEEGLHRKRLIS
YGGLLKEIHKKLNLDDTEEGDLIHTDDDEKADEDGFSIIAMWNWERKNYFIKE"
CDS complement(2356..3063)
/codon_start=1
/product="hypothetical protein"
/label=hypothetical protein
/note="putative pUB110-derived replication protein"
/protein_id="BAD90929.1"
/translation="MKHGIQSQKVVAEVIKQKPTVRWLFLTLTVKNVYDGEELNKSLSD
MAQGFRRMMQYKKINKNLVGFMRATEVTINNKDNSYNQHMHVLVCVEPTYFKNTENYVN
QKQWIQFWKKAMKLDYDPNVKVQMIRPKNKYKSDIQSAIDETAKYPVKDTDFMTDDEEK
NLKRLSDLEEGLHRKRLISYGGLLKEIHKKLNLDDTEEGDLIHTDDDEKADEDGFSIIA
MWNWERKNYFIKE"
Yamagishi J, Kojima T, Oyamada Y, Fujimoto K, Hattori H, Nakamura S, Inoue M.
pND50 载体载体图谱
pND50 载体载体序列
LOCUS Exported 3772 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pND50 DNA, complete sequence.
ACCESSION AB206288
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3772)
AUTHORS Yamagishi J, Kojima T, Oyamada Y, Fujimoto K, Hattori H, Nakamura S,
Inoue M.
TITLE Alterations in the DNA topoisomerase IV grlA gene responsible for
quinolone resistance in Staphylococcus aureus
JOURNAL Antimicrob. Agents Chemother. 40 (5), 1157-1163 (1996)
PUBMED 8723458
REFERENCE 2 (bases 1 to 3772)
AUTHORS Inoue R, Kaito C, Tanabe M, Kamura K, Akimitsu N, Sekimizu K.
TITLE Genetic identification of two distinct DNA polymerases, DnaE and
PolC, that are essential for chromosomal DNA replication in
Staphylococcus aureus
JOURNAL Mol. Genet. Genomics 266 (4), 564-571 (2001)
PUBMED 11810227
REFERENCE 3 (bases 1 to 3772)
AUTHORS Matsuo M, Kurokawa K, Nishida S, Li Y, Takimura H, Kaito C, Fukuhara
N, Maki H, Miura K, Murakami K, Sekimizu K.
TITLE Isolation and mutation site determination of the
temperature-sensitive murB mutants of Staphylococcus aureus
JOURNAL FEMS Microbiol. Lett. 222 (1), 107-113 (2003)
PUBMED 12757953
REFERENCE 4 (bases 1 to 3772)
AUTHORS Kurokawa K, Matsuo M, Sekimizu K.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2005) Kenji Kurokawa, The University of Tokyo,
Graduate School of Pharmaceutical Sciences; 7-3-1, Hongo, Bunkyo-ku,
Tokyo 113-0033, Japan (E-mail:kurokawa@mol.f.u-tokyo.ac.jp,
URL:http://www.f.u-tokyo.ac.jp/~hassei/, Tel:81-3-5841-4821,
Fax:81-3-5684-2973)
REFERENCE 5 (bases 1 to 3772)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3772
/organism="Cloning vector pND50"
/mol_type="other DNA"
/note="A shuttle vector between Escherichia coli and
Staphylococcus aureus. Harboring the chloramphenicol acetyl
transferase gene derived from pC194, a Staphylococcal
plasmid replication origin from pUB110, an E. coli plasmid
replication origin from pUC19, and a multi-cloning site
from pUC18."
/db_xref="taxon:316466"
misc_feature 1..66
/label=pUC18-derived sequence
/note="pUC18-derived sequence"
misc_feature 1..57
/label=multi-cloning sites of pUC18
/note="multi-cloning sites of pUC18"
misc_feature 67..908
/label=pUC19-derived sequence
/note="pUC19-derived sequence"
rep_origin 264..852
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature join(909..1327,2171..3772)
/label=pUB110-derived sequence
/note="pUB110-derived sequence"
misc_feature 1328..2170
/label=pC194-derived sequence
/note="pC194-derived sequence"
CDS complement(1427..2077)
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/function="chloramphenicol resistance"
/label=cat
/experiment="experimental evidence, no additional details
recorded"
/protein_id="BAD90928.1"
/translation="MNFNKIDLDNWKRKEIFNHYLNQQTTFSITTEIDISVLYRNIKQE
GYKFYPAFIFLVTRVINSNTAFRTGYNSDGELGYWDKLEPLYTIFDGVSKTFSGIWTPV
KNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSLSIIPWTSFTGFNLNINNNSNYL
LPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELSDRPNDWLL"
gene complement(1427..2077)
/gene="cat"
/label=cat
CDS complement(2356..3360)
/codon_start=1
/gene="repB"
/product="RepB replication protein"
/label=repB
/note="from Enterococcus faecalis plasmid pAM-alpha-1"
/db_xref="GI:22652809"
/protein_id="AAN03827.1"
/translation="MGVSFNIMCPNSSIYSDEKSRVLVDKTKSGKVRPWREKKIANVDY
FELLHILEFKKAERVKDCAEILEYKQNRETGERKLYRVWFCKSRLCPMCNWRRAMKHGI
QSQKVVAEVIKQKPTVRWLFLTLTVKNVYDGEELNKSLSDMAQGFRRMMQYKKINKNLV
GFMRATEVTINNKDNSYNQHMHVLVCVEPTYFKNTENYVNQKQWIQFWKKAMKLDYDPN
VKVQMIRPKNKYKSDIQSAIDETAKYPVKDTDFMTDDEEKNLKRLSDLEEGLHRKRLIS
YGGLLKEIHKKLNLDDTEEGDLIHTDDDEKADEDGFSIIAMWNWERKNYFIKE"
CDS complement(2356..3063)
/codon_start=1
/product="hypothetical protein"
/label=hypothetical protein
/note="putative pUB110-derived replication protein"
/protein_id="BAD90929.1"
/translation="MKHGIQSQKVVAEVIKQKPTVRWLFLTLTVKNVYDGEELNKSLSD
MAQGFRRMMQYKKINKNLVGFMRATEVTINNKDNSYNQHMHVLVCVEPTYFKNTENYVN
QKQWIQFWKKAMKLDYDPNVKVQMIRPKNKYKSDIQSAIDETAKYPVKDTDFMTDDEEK
NLKRLSDLEEGLHRKRLISYGGLLKEIHKKLNLDDTEEGDLIHTDDDEKADEDGFSIIA
MWNWERKNYFIKE"