LOCUS Exported 5625 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Shuttle vector pMV3319-Edim6, complete sequence.
ACCESSION DQ115377
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5625)
AUTHORS Dennehy ME, Bourn W, Steele AD, Williamson A-L.
TITLE Recombinant BCG expressing rotavirus VP6 partially protects mice
from rotavirus challenge
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5625)
AUTHORS Dennehy ME.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2005) Medical Virology, University of Cape Town,
Anzio Road, Observatory, Cape Town 7925, South Africa
REFERENCE 3 (bases 1 to 5625)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5625
/organism="Shuttle vector pMV3319-Edim6"
/mol_type="other DNA"
/note="Mycobacterium-E. coli shuttle vector; EDIM rotavirus
VP6 of GenBank Accession Number U65988 cloned into
EcoR1-Hind111 sites of shuttle vector pMV3319 of GenBank
Accession Number AY947541"
/db_xref="taxon:336695"
misc_feature 6..1218
/note="APH1 region of Tn903 encoding
aminoglycoside-3-phosphotransferase, conferring kanamycin
resistance"
CDS 120..935
/codon_start=1
/gene="aph(3)-Ia"
/product="aminoglycoside phosphotransferase"
/label=KanR
/note="confers resistance to kanamycin in bacteria or G418
(Geneticin(R)) in eukaryotes"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPHAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHNLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
rep_origin 1223..2009
/label=OriE region derived from pUC19
/note="OriE region derived from pUC19"
rep_origin 1267..1855
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 2462..2655
/note="attP region derived from Mycobacteriophage L5 of
GenBank Accession Number M65194"
misc_feature 3000..3888
/note="integrase region derived from Mycobacteriophage L5
of GenBank Accession Number M65194"
regulatory 3896..4136
/regulatory_class="promoter"
/note="derived from Mycobacterium bovis hsp60 promoter of
GenBank Accession Number M17705"
CDS 4201..5487
/codon_start=1
/product="19kDa antigen/VP6 chimera"
/label=19kDa antigen/VP6 chimera
/note="21 amino acids of Mycobacterium tuberculosis 19 kDa
signal sequence, first 7 amino acids of 19 kDa
mature-protein, 3 additional amino acids and 397 amino
acids of rotavirus EDIM VP6"
/protein_id="AAZ16495.1"
/translation="MKRGLTVAVAGAAILVAGLSGCSSNKSTDPKMDVLYSISRTLKDA
RDKIVEGTLYSNVSDLIQQFNQMLVTMNGNEFQTGGIGNLPLRNWNFDFGLLGTTLLNL
DANYVESARTTIDYFVDFIDNVCMDEMMRESQRNGIAPQSDALRKLSGVKFRRINFNNS
SEYIENWNLQNRRQRTGFTFHKPNIFPYSASFTLNRSQPQHDNLMGTMWLNAGSEIQVA
GFDYSCAINAPANIQQFEHIVQLRRVLTTATITLLPDAERFSFPRVINSADGATTWYFN
PVILRPNNVEVEFLLNGQVINTYQARFGTIVARNFDTIRLSFQLMRPPNMTPAVTALFP
NAQPFEHHATVGLTLRIDSAICESVLADASETMLANVTSVRQEYAIPVGPVFPPGMNWT
DLITNYSPSREDNLQRVFTVASIRSMLVK"
misc_feature 4201..4284
/note="derived from Mycobacterium tuberculosis 19 kDa
protein of GenBank Accession Number J03838"
sig_peptide 4201..4263
/note="derived from Mycobacterium tuberculosis 19 kDa
signal peptide"
misc_feature 4294..5487
/note="derived from rotavirus EDIM VP6 of GenBank Accession
Number U65988"
terminator 5543..5589
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
regulatory 5546..5589
/regulatory_class="terminator"
/note="rrnBR1"
LOCUS Exported 5625 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Shuttle vector pMV3319-Edim6, complete sequence.
ACCESSION DQ115377
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5625)
AUTHORS Dennehy ME, Bourn W, Steele AD, Williamson A-L.
TITLE Recombinant BCG expressing rotavirus VP6 partially protects mice
from rotavirus challenge
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5625)
AUTHORS Dennehy ME.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2005) Medical Virology, University of Cape Town,
Anzio Road, Observatory, Cape Town 7925, South Africa
REFERENCE 3 (bases 1 to 5625)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5625
/organism="Shuttle vector pMV3319-Edim6"
/mol_type="other DNA"
/note="Mycobacterium-E. coli shuttle vector; EDIM rotavirus
VP6 of GenBank Accession Number U65988 cloned into
EcoR1-Hind111 sites of shuttle vector pMV3319 of GenBank
Accession Number AY947541"
/db_xref="taxon:336695"
misc_feature 6..1218
/note="APH1 region of Tn903 encoding
aminoglycoside-3-phosphotransferase, conferring kanamycin
resistance"
CDS 120..935
/codon_start=1
/gene="aph(3)-Ia"
/product="aminoglycoside phosphotransferase"
/label=KanR
/note="confers resistance to kanamycin in bacteria or G418
(Geneticin(R)) in eukaryotes"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPHAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHNLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
rep_origin 1223..2009
/label=OriE region derived from pUC19
/note="OriE region derived from pUC19"
rep_origin 1267..1855
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 2462..2655
/note="attP region derived from Mycobacteriophage L5 of
GenBank Accession Number M65194"
misc_feature 3000..3888
/note="integrase region derived from Mycobacteriophage L5
of GenBank Accession Number M65194"
regulatory 3896..4136
/regulatory_class="promoter"
/note="derived from Mycobacterium bovis hsp60 promoter of
GenBank Accession Number M17705"
CDS 4201..5487
/codon_start=1
/product="19kDa antigen/VP6 chimera"
/label=19kDa antigen/VP6 chimera
/note="21 amino acids of Mycobacterium tuberculosis 19 kDa
signal sequence, first 7 amino acids of 19 kDa
mature-protein, 3 additional amino acids and 397 amino
acids of rotavirus EDIM VP6"
/protein_id="AAZ16495.1"
/translation="MKRGLTVAVAGAAILVAGLSGCSSNKSTDPKMDVLYSISRTLKDA
RDKIVEGTLYSNVSDLIQQFNQMLVTMNGNEFQTGGIGNLPLRNWNFDFGLLGTTLLNL
DANYVESARTTIDYFVDFIDNVCMDEMMRESQRNGIAPQSDALRKLSGVKFRRINFNNS
SEYIENWNLQNRRQRTGFTFHKPNIFPYSASFTLNRSQPQHDNLMGTMWLNAGSEIQVA
GFDYSCAINAPANIQQFEHIVQLRRVLTTATITLLPDAERFSFPRVINSADGATTWYFN
PVILRPNNVEVEFLLNGQVINTYQARFGTIVARNFDTIRLSFQLMRPPNMTPAVTALFP
NAQPFEHHATVGLTLRIDSAICESVLADASETMLANVTSVRQEYAIPVGPVFPPGMNWT
DLITNYSPSREDNLQRVFTVASIRSMLVK"
misc_feature 4201..4284
/note="derived from Mycobacterium tuberculosis 19 kDa
protein of GenBank Accession Number J03838"
sig_peptide 4201..4263
/note="derived from Mycobacterium tuberculosis 19 kDa
signal peptide"
misc_feature 4294..5487
/note="derived from rotavirus EDIM VP6 of GenBank Accession
Number U65988"
terminator 5543..5589
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
regulatory 5546..5589
/regulatory_class="terminator"
/note="rrnBR1"