LOCUS Exported 5086 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Positive selection vector pMTet1, complete sequence.
ACCESSION AF438204
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5086)
AUTHORS Matin MM, Hornby DP.
TITLE A positive selection vector combining tetracycline resistance that
eliminates the need for bacterial plating
JOURNAL Anal. Biochem. 278 (1), 46-51 (2000)
PUBMED 10640352
REFERENCE 2 (bases 1 to 5086)
AUTHORS Matin MM, Hornby DP.
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2001) Molecular Biology, Krebs Institute, Firth
Court, Western Bank, Sheffield S10 2TN, UK
REFERENCE 3 (bases 1 to 5086)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5086
/organism="Positive selection vector pMTet1"
/mol_type="genomic DNA"
/db_xref="taxon:177164"
CDS 92..1282
/codon_start=1
/gene="tetA(C)"
/product="tetracycline resistance protein"
/label=tetA(C)
/note="modified form of the pBR322 tetA(C)"
/protein_id="AAL31631.1"
/translation="MKSNNALIVILGTVTLDAVGIGLVMPVLPGLLRDIVHSDSIASHY
GVLLALYALMQFLCAPVLGALSDRFGRRPVLLASLLGATIDYAIMATTPVLWILYAGRI
VAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAISLHAPF
LAAAVLNGLNLLLGCFLMQESHKGERRPMPLRAFNPVSSFRWARGMTIVAALMTVFFIM
QLVGQVPAALWVIFGEDRFRWSATMIGLSLAVFGILHALAQAFVTGPATKRFGEKQAII
AGMAADALGYVLLAFATRGWMAFPIMILLASGGIGMPALQAMLSRQVDDDHQGQLQGSL
AALTSLTSITGPLIVTAIYAASASTWNGLAWIVGAALYLVCLPALRRGAWSRATST"
gene 92..1282
/gene="tetA(C)"
/label=tetA(C)
rep_origin 2799..3387
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3675..3696
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 3711..3741
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3749..3765
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 3773..3789
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 3829..5085
/codon_start=1
/product="C5 DNA methyltransferase"
/label=C5 DNA methyltransferase
/note="from M.MspIm"
/protein_id="AAL31632.1"
/translation="MKPEILKLIRSKLDLTQKQASEIIEVSDKAWQQWESGKTEMHPAY
YSFLQEKLKDKINFEELSAQKTLQKKIFDKYNQNQITKNAEELAEITHIEERKDAYSSD
FKFIDLFSGIGGIRQSFEVNGGKCVFSSEIDPFAKFTYYTNFGVVPFGDITKVEATTIP
EHDILCAGFPGQPWSHMGKREGFEHPTQGTMFHEIVRIIETKKTPVLFLENVPGLINHD
DGNTLKVIIETLEDMGYKVHHTVLDASHFGIPQKRKRFYLVAFLNQNIHFEFPKPPMIS
KDIGEVLESDVTGYSISEHLQKSYLFKKDDGKPSLIDKNTTGAVKTLVSTYHKIQRLTG
TFVKDGETAIRLLTTNECKAIMGFPKDFVIPVSRTQMYRQMGNSVVVPVVTKIAEQISL
ALKTVNQQSPQENFELELV"
LOCUS Exported 5086 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Positive selection vector pMTet1, complete sequence.
ACCESSION AF438204
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5086)
AUTHORS Matin MM, Hornby DP.
TITLE A positive selection vector combining tetracycline resistance that
eliminates the need for bacterial plating
JOURNAL Anal. Biochem. 278 (1), 46-51 (2000)
PUBMED 10640352
REFERENCE 2 (bases 1 to 5086)
AUTHORS Matin MM, Hornby DP.
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2001) Molecular Biology, Krebs Institute, Firth
Court, Western Bank, Sheffield S10 2TN, UK
REFERENCE 3 (bases 1 to 5086)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5086
/organism="Positive selection vector pMTet1"
/mol_type="genomic DNA"
/db_xref="taxon:177164"
CDS 92..1282
/codon_start=1
/gene="tetA(C)"
/product="tetracycline resistance protein"
/label=tetA(C)
/note="modified form of the pBR322 tetA(C)"
/protein_id="AAL31631.1"
/translation="MKSNNALIVILGTVTLDAVGIGLVMPVLPGLLRDIVHSDSIASHY
GVLLALYALMQFLCAPVLGALSDRFGRRPVLLASLLGATIDYAIMATTPVLWILYAGRI
VAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAISLHAPF
LAAAVLNGLNLLLGCFLMQESHKGERRPMPLRAFNPVSSFRWARGMTIVAALMTVFFIM
QLVGQVPAALWVIFGEDRFRWSATMIGLSLAVFGILHALAQAFVTGPATKRFGEKQAII
AGMAADALGYVLLAFATRGWMAFPIMILLASGGIGMPALQAMLSRQVDDDHQGQLQGSL
AALTSLTSITGPLIVTAIYAASASTWNGLAWIVGAALYLVCLPALRRGAWSRATST"
gene 92..1282
/gene="tetA(C)"
/label=tetA(C)
rep_origin 2799..3387
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3675..3696
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 3711..3741
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3749..3765
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 3773..3789
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 3829..5085
/codon_start=1
/product="C5 DNA methyltransferase"
/label=C5 DNA methyltransferase
/note="from M.MspIm"
/protein_id="AAL31632.1"
/translation="MKPEILKLIRSKLDLTQKQASEIIEVSDKAWQQWESGKTEMHPAY
YSFLQEKLKDKINFEELSAQKTLQKKIFDKYNQNQITKNAEELAEITHIEERKDAYSSD
FKFIDLFSGIGGIRQSFEVNGGKCVFSSEIDPFAKFTYYTNFGVVPFGDITKVEATTIP
EHDILCAGFPGQPWSHMGKREGFEHPTQGTMFHEIVRIIETKKTPVLFLENVPGLINHD
DGNTLKVIIETLEDMGYKVHHTVLDASHFGIPQKRKRFYLVAFLNQNIHFEFPKPPMIS
KDIGEVLESDVTGYSISEHLQKSYLFKKDDGKPSLIDKNTTGAVKTLVSTYHKIQRLTG
TFVKDGETAIRLLTTNECKAIMGFPKDFVIPVSRTQMYRQMGNSVVVPVVTKIAEQISL
ALKTVNQQSPQENFELELV"