LOCUS Exported 4266 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Saccharomyces cerevisiae vector pMM25, complete sequence.
ACCESSION GQ988388
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4266)
AUTHORS Moscariello MM, Sutherland BM.
TITLE Transferring linear DNA fragments in the yeast Saccharomyces
cerevisiae: A new in vivo eukaryotic system that reveals deleterious
combinations of DNA cluster damage
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4266)
AUTHORS Moscariello MM, Sutherland BM.
TITLE Direct Submission
JOURNAL Submitted (22-SEP-2009) Biology, Brookhaven National Laboratory, 50
Bell Avenue, Upton, NY 11973, USA
REFERENCE 3 (bases 1 to 4266)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4266
/organism="Saccharomyces cerevisiae vector pMM25"
/mol_type="other DNA"
/note="hybrid cassette His3-Ade2 cloned in pBluescript II
SK"
/db_xref="taxon:683353"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind 670..686
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
gene 713..1659
/gene="ADE2"
/label=ADE2
regulatory 713..885
/regulatory_class="promoter"
/gene="ADE2"
CDS 886..1659
/codon_start=1
/gene="ADE2"
/product="phosphoribosylaminoimidazole carboxylase"
/label=ADE2
/note="catalyzes a step in de novo purine nucleotide
biosynthetic pathway"
/protein_id="ACX71835.1"
/translation="MDSRTVGILGGGQLGRMIVEAANRLNIKTVILDAENSPAKQISNS
NDHVNGSFSNPLDIEKLAEKCDVLTIEIEHVDVPTLKNLQVKHPKLKIYPSPETIRLIQ
DKYIQKEHLIKNGIAVTQSVPVEQASETSLLNVGRDLGFPFVLKSRTLAYDGRGNFVVK
NKEMIPEALEVLKDRPLYAEKWAPFTKELAVMIVRSVNGLVFSYPIVETIHKDNICDLC
YAPARVPDSVQLKAKLLAENAIKSFPGCGIFGVEMF"
gene 1660..2018
/gene="HIS3"
/label=HIS3
regulatory 1660..1999
/regulatory_class="promoter"
/gene="HIS3"
promoter 1812..1999
/gene="S. cerevisiae HIS3"
/label=HIS3 promoter
CDS 2000..2018
/codon_start=1
/gene="HIS3"
/product="imidazoleglycerol-phosphate dehydratase"
/label=HIS3
/note="catalyzes the sixth step in histidine biosynthesis"
/protein_id="ACX71836.1"
/translation="MRQSRK"
primer_bind complement(2025..2041)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2078..2096)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2117..2133)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2141..2157
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2165..2195)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2210..2231
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2519..3107)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3278..4138)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4139..4243)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 4266 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Saccharomyces cerevisiae vector pMM25, complete sequence.
ACCESSION GQ988388
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4266)
AUTHORS Moscariello MM, Sutherland BM.
TITLE Transferring linear DNA fragments in the yeast Saccharomyces
cerevisiae: A new in vivo eukaryotic system that reveals deleterious
combinations of DNA cluster damage
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4266)
AUTHORS Moscariello MM, Sutherland BM.
TITLE Direct Submission
JOURNAL Submitted (22-SEP-2009) Biology, Brookhaven National Laboratory, 50
Bell Avenue, Upton, NY 11973, USA
REFERENCE 3 (bases 1 to 4266)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4266
/organism="Saccharomyces cerevisiae vector pMM25"
/mol_type="other DNA"
/note="hybrid cassette His3-Ade2 cloned in pBluescript II
SK"
/db_xref="taxon:683353"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind 670..686
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
gene 713..1659
/gene="ADE2"
/label=ADE2
regulatory 713..885
/regulatory_class="promoter"
/gene="ADE2"
CDS 886..1659
/codon_start=1
/gene="ADE2"
/product="phosphoribosylaminoimidazole carboxylase"
/label=ADE2
/note="catalyzes a step in de novo purine nucleotide
biosynthetic pathway"
/protein_id="ACX71835.1"
/translation="MDSRTVGILGGGQLGRMIVEAANRLNIKTVILDAENSPAKQISNS
NDHVNGSFSNPLDIEKLAEKCDVLTIEIEHVDVPTLKNLQVKHPKLKIYPSPETIRLIQ
DKYIQKEHLIKNGIAVTQSVPVEQASETSLLNVGRDLGFPFVLKSRTLAYDGRGNFVVK
NKEMIPEALEVLKDRPLYAEKWAPFTKELAVMIVRSVNGLVFSYPIVETIHKDNICDLC
YAPARVPDSVQLKAKLLAENAIKSFPGCGIFGVEMF"
gene 1660..2018
/gene="HIS3"
/label=HIS3
regulatory 1660..1999
/regulatory_class="promoter"
/gene="HIS3"
promoter 1812..1999
/gene="S. cerevisiae HIS3"
/label=HIS3 promoter
CDS 2000..2018
/codon_start=1
/gene="HIS3"
/product="imidazoleglycerol-phosphate dehydratase"
/label=HIS3
/note="catalyzes the sixth step in histidine biosynthesis"
/protein_id="ACX71836.1"
/translation="MRQSRK"
primer_bind complement(2025..2041)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2078..2096)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2117..2133)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2141..2157
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2165..2195)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2210..2231
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2519..3107)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3278..4138)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4139..4243)
/gene="bla"
/label=AmpR promoter