LOCUS Exported 8793 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pMK33-NTAP(GS), complete sequence.
ACCESSION EU663570
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8793)
AUTHORS Kyriakakis P, Tipping M, Abed L, Veraksa A.
TITLE Tandem affinity purification in Drosophila: The advantages of the
GS-TAP system
JOURNAL Fly (Austin) 2 (4) (2008) In press
PUBMED 18719405
REFERENCE 2 (bases 1 to 8793)
AUTHORS Veraksa A, Kyriakakis P, Tipping M, Abed L.
TITLE Direct Submission
JOURNAL Submitted (20-APR-2008) Biology Department, University of
Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA
REFERENCE 3 (bases 1 to 8793)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..8793
/organism="Cloning vector pMK33-NTAP(GS)"
/mol_type="other DNA"
/note="mammalian GS-TAP vectors were originally described
in the following publication: Burckstummer T. et al. (2006)
Nature Methods 3, 1013-1019; designed for making protein
fusions tagged with the GS-TAP tag and for generating
stable Drosophila cell lines under hygromycin selection;
GS-TAP fusions are inducible with copper sulfate"
/db_xref="taxon:546944"
misc_feature 9..2689
/note="pAT153 vector backbone; Amp resistance; low copy
number"
rep_origin complement(865..1453)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(1624..2484)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(2485..2589)
/gene="bla"
/label=AmpR promoter
repeat_region 4070..4354
/label=derived from copia transposon
/note="derived from copia transposon"
promoter 4071..4350
/label=copia promoter
/note="strong promoter from the Drosophila transposable
element copia (Sinclair et al., 1986)"
CDS 4396..5421
/codon_start=1
/product="hygromycin phosphotransferase"
/label=hygromycin phosphotransferase
/protein_id="ACF35718.1"
/translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRG
YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF
GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG
NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK
E"
intron 5784..5849
/label=small t intron
/note="SV40 (simian virus 40) small t antigen intron"
CDS 5979..5999
/codon_start=1
/product="nuclear localization signal of SV40 (simian virus
40) large T antigen"
/label=SV40 NLS
/translation="PKKKRKV"
polyA_signal 6424..6558
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
regulatory 6559..7000
/regulatory_class="promoter"
/note="metallothionein promoter"
promoter 6559..6985
/label=MT promoter
/note="Drosophila metallothionein promoter"
CDS 7001..7546
/codon_start=1
/product="NTAP(GS) tag"
/label=NTAP
/protein_id="ACF35719.1"
/translation="MGTPAVTTYKLVINGKTLKGETTTKAVDAETAEKAFKQYANDNGV
DGVWTYDDATKTFTVTEVNTPAVTTYKLVINGKTLKGETTTKAVDAETAEKAFKQYAND
NGVDGVWTYDDATKTFTVTEIGENLYFQGIDENLYFQGGSMDEKTTGWRGGHVVEGLAG
ELEQLRARLEHHPQGQREP"
CDS 7379..7399
/codon_start=1
/product="tobacco etch virus (TEV) protease recognition and
cleavage site"
/label=TEV site
/translation="ENLYFQG"
CDS 7406..7426
/codon_start=1
/product="tobacco etch virus (TEV) protease recognition and
cleavage site"
/label=TEV site
/translation="ENLYFQG"
CDS 7433..7546
/codon_start=1
/product="streptavidin-binding peptide"
/label=SBP
/note="selected from a peptide library; binds streptavidin
with nanomolar affinity (Keefe et al., 2001)"
/translation="MDEKTTGWRGGHVVEGLAGELEQLRARLEHHPQGQREP"
misc_feature 7547..7576
/note="unique cloning sites: XhoI, BamHI, EcoRV, KpnI,
SpeI; polylinker"
LOCUS Exported 8793 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pMK33-NTAP(GS), complete sequence.
ACCESSION EU663570
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8793)
AUTHORS Kyriakakis P, Tipping M, Abed L, Veraksa A.
TITLE Tandem affinity purification in Drosophila: The advantages of the
GS-TAP system
JOURNAL Fly (Austin) 2 (4) (2008) In press
PUBMED 18719405
REFERENCE 2 (bases 1 to 8793)
AUTHORS Veraksa A, Kyriakakis P, Tipping M, Abed L.
TITLE Direct Submission
JOURNAL Submitted (20-APR-2008) Biology Department, University of
Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA
REFERENCE 3 (bases 1 to 8793)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..8793
/organism="Cloning vector pMK33-NTAP(GS)"
/mol_type="other DNA"
/note="mammalian GS-TAP vectors were originally described
in the following publication: Burckstummer T. et al. (2006)
Nature Methods 3, 1013-1019; designed for making protein
fusions tagged with the GS-TAP tag and for generating
stable Drosophila cell lines under hygromycin selection;
GS-TAP fusions are inducible with copper sulfate"
/db_xref="taxon:546944"
misc_feature 9..2689
/note="pAT153 vector backbone; Amp resistance; low copy
number"
rep_origin complement(865..1453)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(1624..2484)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(2485..2589)
/gene="bla"
/label=AmpR promoter
repeat_region 4070..4354
/label=derived from copia transposon
/note="derived from copia transposon"
promoter 4071..4350
/label=copia promoter
/note="strong promoter from the Drosophila transposable
element copia (Sinclair et al., 1986)"
CDS 4396..5421
/codon_start=1
/product="hygromycin phosphotransferase"
/label=hygromycin phosphotransferase
/protein_id="ACF35718.1"
/translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRG
YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF
GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG
NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK
E"
intron 5784..5849
/label=small t intron
/note="SV40 (simian virus 40) small t antigen intron"
CDS 5979..5999
/codon_start=1
/product="nuclear localization signal of SV40 (simian virus
40) large T antigen"
/label=SV40 NLS
/translation="PKKKRKV"
polyA_signal 6424..6558
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
regulatory 6559..7000
/regulatory_class="promoter"
/note="metallothionein promoter"
promoter 6559..6985
/label=MT promoter
/note="Drosophila metallothionein promoter"
CDS 7001..7546
/codon_start=1
/product="NTAP(GS) tag"
/label=NTAP
/protein_id="ACF35719.1"
/translation="MGTPAVTTYKLVINGKTLKGETTTKAVDAETAEKAFKQYANDNGV
DGVWTYDDATKTFTVTEVNTPAVTTYKLVINGKTLKGETTTKAVDAETAEKAFKQYAND
NGVDGVWTYDDATKTFTVTEIGENLYFQGIDENLYFQGGSMDEKTTGWRGGHVVEGLAG
ELEQLRARLEHHPQGQREP"
CDS 7379..7399
/codon_start=1
/product="tobacco etch virus (TEV) protease recognition and
cleavage site"
/label=TEV site
/translation="ENLYFQG"
CDS 7406..7426
/codon_start=1
/product="tobacco etch virus (TEV) protease recognition and
cleavage site"
/label=TEV site
/translation="ENLYFQG"
CDS 7433..7546
/codon_start=1
/product="streptavidin-binding peptide"
/label=SBP
/note="selected from a peptide library; binds streptavidin
with nanomolar affinity (Keefe et al., 2001)"
/translation="MDEKTTGWRGGHVVEGLAGELEQLRARLEHHPQGQREP"
misc_feature 7547..7576
/note="unique cloning sites: XhoI, BamHI, EcoRV, KpnI,
SpeI; polylinker"