| 载体基本信息 |
| 载体名称 |
pMK2030 |
载体抗性 |
Chloramphenicol |
| 载体长度 |
6926 bp |
载体类型 |
Reporter vector |
| 载体来源 |
Humann JL, Schroeder BK, Mortimer MW, House BL, Yurgel SN, Maloney SC, Ward KL, Fallquist HM, Ziemkiewicz HT, Kahn ML. |
pMK2030 载体载体图谱
pMK2030 载体载体序列
LOCUS Exported 6926 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Reporter vector pMK2030, complete sequence.
ACCESSION EU825945
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6926)
AUTHORS Humann JL, Schroeder BK, Mortimer MW, House BL, Yurgel SN, Maloney
SC, Ward KL, Fallquist HM, Ziemkiewicz HT, Kahn ML.
TITLE Construction and expression of sugar kinase transcriptional gene
fusions by using the Sinorhizobium meliloti ORFeome
JOURNAL Appl. Environ. Microbiol. 74 (21), 6756-6765 (2008)
PUBMED 18791020
REFERENCE 2 (bases 1 to 6926)
AUTHORS Mortimer MW, Kahn ML, Humann JL.
TITLE Direct Submission
JOURNAL Submitted (16-JUN-2008) Institute of Biological Chemistry,
Washington State University, Pullman, WA 99164-6340, USA
REFERENCE 3 (bases 1 to 6926)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6926
/organism="Reporter vector pMK2030"
/mol_type="other DNA"
/db_xref="taxon:541044"
rep_origin 16..437
/label=R6K origin of replication
/note="R6K origin of replication"
rep_origin 20..408
/label=R6K gamma ori
/note="gamma replication origin from E. coli plasmid R6K;
requires the R6K initiator protein pi for replication"
misc_feature 438..773
/label=RP4 oriT (origin of transfer)
/note="RP4 oriT (origin of transfer)"
oriT 579..688
/note="incP origin of transfer"
CDS 888..2078
/codon_start=1
/gene="tetA"
/product="tetracycline resistance protein"
/label=tetA
/note="TetA"
/protein_id="ACE95079.1"
/translation="MKSNNALIVILGTVTLDAVGIGLVMPVLPGLLRDIVHSDSIASHY
GVLLALYALMQFLCAPVLGALSDRFGRRPVLLASLLGATIDYAIMATTPVLWILYAGRI
VAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAISLHAPF
LAAAVLNGLNLLLGCFLMQESHKGERRPMPLRAFNPVSSFRWARGMTIVAALMTVLFIM
QLVGQVPAALWVIFGEDRFRWSATMIGLSLAVFGILHALAQAFVTGPATKRFGEKQAII
AGMAADALGYVLLAFATRGWMAFPIMILLASGGIGMPALQAMLSRQVDDDHQGQLQGSL
AALTSLTSITGPLIVTAIYAASASTWNGLAWIVGAALYLVCLPALRRGAWSRATST"
gene 888..2078
/gene="tetA"
/label=tetA
misc_feature complement(2198..2312)
/label=FRT site
/note="FRT site"
protein_bind complement(2229..2276)
/label=FRT
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="FLP-mediated recombination occurs in the 8-bp core
sequence TCTAGAAA (Turan and Bode, 2011)."
misc_feature 2317..2441
/label=attR1
/note="attR1"
protein_bind 2317..2441
/gene="mutant version of attR"
/label=attR1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
promoter 2466..2496
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
CDS 2550..3209
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyl transferase"
/label=cat
/note="chloramphenicol resistance"
/protein_id="ACE95080.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene 2550..3209
/gene="cat"
/label=cat
CDS 3551..3856
/codon_start=1
/gene="ccdB"
/product="DNA gyrase inhibitor"
/label=ccdB
/note="CcdB"
/protein_id="ACE95081.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
gene 3551..3856
/gene="ccdB"
/label=ccdB
misc_feature 3897..4021
/label=attR2
/note="attR2"
protein_bind complement(3897..4021)
/gene="mutant version of attR"
/label=attR2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_feature 4026..4140
/label=FRT site
/note="FRT site"
protein_bind 4062..4109
/label=FRT
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="FLP-mediated recombination occurs in the 8-bp core
sequence TCTAGAAA (Turan and Bode, 2011)."
CDS 4211..4927
/codon_start=1
/gene="gfp"
/product="green fluorescent protein"
/label=gfp
/note="GFP"
/protein_id="ACE95082.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
gene 4211..4927
/gene="gfp"
/label=gfp
primer_bind 4966..4982
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 5020..6831
/codon_start=1
/gene="gusA"
/product="beta-glucuronidase"
/label=gusA
/note="GusA"
/protein_id="ACE95083.1"
/translation="MVRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRAI
AVPGSFNDQFADADIRNYAGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQEV
MEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSYFHD
FFNYAGIHRSVMLYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRDADQQ
VVATGQGTSGTLQVVNPHLWQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAVKGEQF
LINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDW
ADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARD
KNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCDAHTDTISD
LFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMY
TDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRK
PKSAAFLLQKRWTGMNFGEKPQQGGKQ"
gene 5020..6831
/gene="gusA"
/label=gusA
primer_bind complement(6897..6913)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"