LOCUS Exported 4469 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pMG401, complete sequence.
ACCESSION KR360752
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4469)
AUTHORS Emge P.
TITLE Quorum sensing resilience against fluid flow
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4469)
AUTHORS Emge P.
TITLE Direct Submission
JOURNAL Submitted (30-APR-2015) Health Science and Technology, ETH Zurich,
Vladimir-Prelog-Weg 1-5/10, Zurich 8093, Switzerland
REFERENCE 3 (bases 1 to 4469)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4469
/organism="Cloning vector pMG401"
/mol_type="other DNA"
/label=sequence provided by Prof. Francis Arnold, Caltech
/note="sequence provided by Prof. Francis Arnold, Caltech"
/db_xref="taxon:1735269"
RBS 793..804
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
RBS 985..996
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
RBS 1713..1724
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
CDS 1731..2486
/codon_start=1
/product="GFP-LVA"
/label=GFP-LVA
/note="Aequoria victoria green fluorescent protein with LVA
tag"
/protein_id="ALI16837.1"
/translation="MRKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYKRPAANDENYALVA"
CDS 1731..2444
/codon_start=1
/product="Aequoria victoria green fluorescent protein"
/label=GFP
/translation="MRKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
terminator 2535..2621
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
rep_origin complement(2791..3336)
/direction=LEFT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
terminator 3450..3544
/label=lambda t0 terminator
/note="transcription terminator from phage lambda"
CDS complement(3575..4369)
/codon_start=1
/gene="aph(3)-II"
/product="aminoglycoside phosphotransferase"
/label=aph(3)-II
/note="NeoR/KanR; derived from Tn5; confers resistance to
neomycin, kanamycin, and G418 (Geneticin(R))"
/protein_id="ALI16836.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
gene complement(3575..4369)
/gene="aph(3)-II"
/label=aph(3)-II
/note="nptII"
LOCUS Exported 4469 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pMG401, complete sequence.
ACCESSION KR360752
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4469)
AUTHORS Emge P.
TITLE Quorum sensing resilience against fluid flow
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4469)
AUTHORS Emge P.
TITLE Direct Submission
JOURNAL Submitted (30-APR-2015) Health Science and Technology, ETH Zurich,
Vladimir-Prelog-Weg 1-5/10, Zurich 8093, Switzerland
REFERENCE 3 (bases 1 to 4469)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4469
/organism="Cloning vector pMG401"
/mol_type="other DNA"
/label=sequence provided by Prof. Francis Arnold, Caltech
/note="sequence provided by Prof. Francis Arnold, Caltech"
/db_xref="taxon:1735269"
RBS 793..804
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
RBS 985..996
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
RBS 1713..1724
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
CDS 1731..2486
/codon_start=1
/product="GFP-LVA"
/label=GFP-LVA
/note="Aequoria victoria green fluorescent protein with LVA
tag"
/protein_id="ALI16837.1"
/translation="MRKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYKRPAANDENYALVA"
CDS 1731..2444
/codon_start=1
/product="Aequoria victoria green fluorescent protein"
/label=GFP
/translation="MRKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
terminator 2535..2621
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
rep_origin complement(2791..3336)
/direction=LEFT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
terminator 3450..3544
/label=lambda t0 terminator
/note="transcription terminator from phage lambda"
CDS complement(3575..4369)
/codon_start=1
/gene="aph(3)-II"
/product="aminoglycoside phosphotransferase"
/label=aph(3)-II
/note="NeoR/KanR; derived from Tn5; confers resistance to
neomycin, kanamycin, and G418 (Geneticin(R))"
/protein_id="ALI16836.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
gene complement(3575..4369)
/gene="aph(3)-II"
/label=aph(3)-II
/note="nptII"