| 载体基本信息 |
| 载体名称 |
pME3087 |
载体抗性 |
Tetracycline |
| 载体长度 |
6822 bp |
载体类型 |
Suicide vector |
| 载体来源 |
Scott TA, Heine D, Qin Z, Wilkinson B. |
pME3087 载体载体图谱
pME3087 载体载体序列
LOCUS Exported 6822 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Suicide vector pME3087, complete sequence.
ACCESSION KX931444
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6822)
AUTHORS Scott TA, Heine D, Qin Z, Wilkinson B.
TITLE An L-threonine transaldolase is required for
L-threo-beta-hydroxy-alpha-amino acid assembly during obafluorin
biosynthesis
JOURNAL Nat Commun 8, 15935 (2017)
PUBMED 28649989
REFERENCE 2 (bases 1 to 6822)
AUTHORS Scott TA.
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2016) Molecular Microbiology, John Innes Centre,
Norwich Research Park, Norwich, Norfolk NR4 7UH, United Kingdom
REFERENCE 3 (bases 1 to 6822)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..6822
/organism="Suicide vector pME3087"
/mol_type="other DNA"
/db_xref="taxon:1968803"
CDS complement(721..1398)
/codon_start=1
/gene="tetR"
/product="TetR"
/label=tetR
/protein_id="AQZ26562.1"
/translation="MFISDKVSSMTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGV
QQPALYWHFRNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRD
GARIHAGTRPGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSD
AGERGGTVEQAPLSPLLRAAIDAFDEAGPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRK
GDD"
gene complement(721..1398)
/gene="tetR"
/label=tetR
CDS complement(721..1371)
/codon_start=1
/gene="tetR"
/product="tetracycline resistance regulatory protein"
/label=TetR
/translation="MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHF
RNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRDGARIHAGTR
PGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSDAGERGGTVE
QAPLSPLLRAAIDAFDEAGPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRKGDD"
CDS 1402..2676
/codon_start=1
/gene="tetA"
/product="TetA"
/label=tetA
/protein_id="AQZ26563.1"
/translation="MSTNLSVIKNPRVQSDQRRLVRRPDVKPNIPLIVILSTVALDAVG
IGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALVQFACAPVLGALSDRFGRRPILLVS
LAGATVDYAIMATAPFLWVLYIGRIVAGITGATGAVAGAYIADITDGDERARHFGFMSA
CFGFGMVAGPVLGGLMGGFSPHAPFFAAAALNGLNFLTGCFLLPESHKGERRPLRREAL
NPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFG
ILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGI
GMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAG
AALYLLCLPALRRGLWSGAGQRADR"
gene 1402..2676
/gene="tetA"
/label=tetA
CDS 1477..2676
/codon_start=1
/gene="tetA"
/product="tetracycline efflux protein"
/label=TcR
/note="confers resistance to tetracycline"
/translation="MKPNIPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHY
GILLALYALVQFACAPVLGALSDRFGRRPILLVSLAGATVDYAIMATAPFLWVLYIGRI
VAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHAPF
FAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAVFFIM
QLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALM
LGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSL
AALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSGAGQRADR
"
CDS 2679..2825
/codon_start=1
/gene="exc2"
/product="Exc2"
/label=exc2
/protein_id="AQZ26564.1"
/translation="METIGNSLRGTTQFAGTDYRSKDLTPKKSRLLADTISAVYLDGYE
GRQ"
gene 2679..2825
/gene="exc2"
/label=exc2
misc_feature 2800..3083
/label=cer region
/note="ColE1-derived recombination site that helps to
maintain plasmids as monomers"
CDS complement(3143..3376)
/codon_start=1
/gene="mbeD"
/product="MbeD"
/label=mbeD
/protein_id="AQZ26565.1"
/translation="MTELETHLLNALEQLQQDYMQRLSEWESAFVELQKMFSLTQRDNA
MLNERVMQLSQQVQHLSEQTERLSQLYSENWR"
gene complement(3143..3376)
/gene="mbeD"
/label=mbeD
CDS complement(3383..3901)
/codon_start=1
/gene="mbeB"
/product="MbeB"
/label=mbeB
/protein_id="AQZ26566.1"
/translation="MSNLLQTGAEFEKKLKERAESTEKMLNNEFRRLGESVSEAVTSNE
TKIRDAIALFTASTEESLEKHREGVKEAMMQHRRDVLKLAGNTGMMLLGIVFLLFTASG
GTLWYLGGRIQANLEEIRKQEETLQKLNAKTWGVEFVQDGNRKFLVLPYGKSAEVIPFQ
GKEWVHLKE"
gene complement(3383..3901)
/gene="mbeB"
/label=mbeB
CDS complement(4579..4917)
/codon_start=1
/gene="mbeC"
/product="MbeC"
/label=mbeC
/protein_id="AQZ26567.1"
/translation="MKRERMLTIRVTDDEHARLLERCEGKQLAVWMRRVCLGEPVARSG
KLPTLAPPLLRQLAAIGNNLNQTARKVNSGQWSSGDRVQVVAALMAIGDELRRLRLAVR
EQGARDDS"
gene complement(4579..4917)
/gene="mbeC"
/label=mbeC
CDS 4870..5157
/codon_start=1
/gene="rop"
/product="Rop"
/label=rop
/protein_id="AQZ26568.1"
/translation="MFIISNPYCEHPLAFHRYHYPMNRNPPYTEASVTKQEKTALNMAR
FIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFGDDGENL"
gene 4870..5157
/gene="rop"
/label=rop
oriT 5242..5330
/note="oriT"
rep_origin 5758..5993
/label=oriV
/note="oriV"
CDS 6369..6710
/codon_start=1
/gene="colE1"
/product="colicin E1 immunity protein"
/label=colE1
/protein_id="AQZ26569.1"
/translation="MSLRYYIKNILFGLYCTLIYIYLITKNSEGYYFLVSDKMLYAIVI
STILCPYSKYAIEYIAFNFIKKDFFERRKNLNNAPVAKLNLFMLYNLLCLVLAIPFGLL
GLFISIKNN"
gene 6369..6710
/gene="colE1"
/label=colE1
misc_feature 6766..6822
/label=multiple cloning site
/note="multiple cloning site"