LOCUS Exported 4295 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Moss transformation vector pMBL6, complete sequence.
ACCESSION DQ228131
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4295)
AUTHORS Knight CD, Cove DJ, Cuming AC, Quatrano RS.
TITLE Moss Gene Technology
JOURNAL (in) Gilmartin,P.M. and Bowler,C. (Eds.); MOLECULAR PLANT BIOLOGY:
285-301; Oxford University Press, Oxford, NY, USA (2002)
REFERENCE 2 (bases 1 to 4295)
AUTHORS Machuka J, Knight CD, Cove DJ, Cuming AC.
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2005) Centre for Plant Sciences, Leeds University,
Leeds, West Yorkshire LS2 9JT, UK
REFERENCE 3 (bases 1 to 4295)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4295
/organism="Moss transformation vector pMBL6"
/lab_host="Physcomitrella patens"
/mol_type="other DNA"
/db_xref="taxon:351699"
polyA_signal 347..523
/label=CaMV poly(A) signal
/note="cauliflower mosaic virus polyadenylation signal"
regulatory 357..508
/regulatory_class="terminator"
/note="Cauliflower Mosaic Virus gene 6 terminator"
misc_feature 958..1034
/label=pBlusecript II SK+ multiple cloning site
/note="pBlusecript II SK+ multiple cloning site"
primer_bind 960..976
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(1010..1026)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(1076..1092)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1100..1116
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1124..1154)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1169..1190
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(1478..2066)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2237..3097)
/codon_start=1
/gene="bla"
/product="beta lactamase"
/function="confers resistance to beta-lactam antibiotics"
/label=bla
/protein_id="ABB17065.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(2237..3097)
/gene="bla"
/label=bla
promoter complement(3098..3202)
/gene="bla"
/label=AmpR promoter
misc_feature 3247..3354
/label=pBluescript II SK+ multiple cloning site
/note="pBluescript II SK+ multiple cloning site"
primer_bind 3271..3287
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(3321..3337)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
regulatory 3356..3746
/regulatory_class="promoter"
/note="Cauliflower Mosaic Virus 35S promoter"
promoter 3404..3749
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
CDS 3779..278
/codon_start=1
/gene="nptII"
/product="neomycin phosphotransferase"
/function="confers resistance to kanamycin and G418"
/label=nptII
/protein_id="ABB17066.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
gene 3779..278
/gene="nptII"
/label=nptII
LOCUS Exported 4295 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Moss transformation vector pMBL6, complete sequence.
ACCESSION DQ228131
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4295)
AUTHORS Knight CD, Cove DJ, Cuming AC, Quatrano RS.
TITLE Moss Gene Technology
JOURNAL (in) Gilmartin,P.M. and Bowler,C. (Eds.); MOLECULAR PLANT BIOLOGY:
285-301; Oxford University Press, Oxford, NY, USA (2002)
REFERENCE 2 (bases 1 to 4295)
AUTHORS Machuka J, Knight CD, Cove DJ, Cuming AC.
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2005) Centre for Plant Sciences, Leeds University,
Leeds, West Yorkshire LS2 9JT, UK
REFERENCE 3 (bases 1 to 4295)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4295
/organism="Moss transformation vector pMBL6"
/lab_host="Physcomitrella patens"
/mol_type="other DNA"
/db_xref="taxon:351699"
polyA_signal 347..523
/label=CaMV poly(A) signal
/note="cauliflower mosaic virus polyadenylation signal"
regulatory 357..508
/regulatory_class="terminator"
/note="Cauliflower Mosaic Virus gene 6 terminator"
misc_feature 958..1034
/label=pBlusecript II SK+ multiple cloning site
/note="pBlusecript II SK+ multiple cloning site"
primer_bind 960..976
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(1010..1026)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(1076..1092)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1100..1116
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1124..1154)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1169..1190
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(1478..2066)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2237..3097)
/codon_start=1
/gene="bla"
/product="beta lactamase"
/function="confers resistance to beta-lactam antibiotics"
/label=bla
/protein_id="ABB17065.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(2237..3097)
/gene="bla"
/label=bla
promoter complement(3098..3202)
/gene="bla"
/label=AmpR promoter
misc_feature 3247..3354
/label=pBluescript II SK+ multiple cloning site
/note="pBluescript II SK+ multiple cloning site"
primer_bind 3271..3287
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(3321..3337)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
regulatory 3356..3746
/regulatory_class="promoter"
/note="Cauliflower Mosaic Virus 35S promoter"
promoter 3404..3749
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
CDS 3779..278
/codon_start=1
/gene="nptII"
/product="neomycin phosphotransferase"
/function="confers resistance to kanamycin and G418"
/label=nptII
/protein_id="ABB17066.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
gene 3779..278
/gene="nptII"
/label=nptII