Lee PT, Zirin J, Kanca O, Lin WW, Schulze KL, Li-Kroeger D, Tao R, Devereaux C, Hu Y, Chung V, Fang Y, He Y, Pan H, Ge M, Zuo Z, Housden BE, Mohr SE, Yamamoto S, Levis RW, Spradling AC, Perrimon N, Be
pM37(2) 载体载体图谱
pM37(2) 载体载体序列
LOCUS Exported 7830 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION CRIMIC donor vector pM37(2), complete sequence.
ACCESSION MH753012
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7830)
AUTHORS Lee PT, Zirin J, Kanca O, Lin WW, Schulze KL, Li-Kroeger D, Tao R,
Devereaux C, Hu Y, Chung V, Fang Y, He Y, Pan H, Ge M, Zuo Z,
Housden BE, Mohr SE, Yamamoto S, Levis RW, Spradling AC, Perrimon N,
Bellen HJ.
TITLE A gene-specific T2A-GAL4 library for Drosophila
JOURNAL Elife 7, e35574 (2018)
PUBMED 29565247
REFERENCE 2 (bases 1 to 7830)
AUTHORS Lee P-T., Zirin J, Kanca O, Lin W-W., Schulze KL, Li-Kroeger D, Tao
R, Devereaux C, Hu Y, Chung V, Fang Y, He Y, Pan H, Ge M, Zuo Z,
Housden BE, Mohr SE, Yamamoto S, Levis RW, Spradling AC, Perrimon N,
Bellen HJ.
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2018) HHMI, Molecular & Human Genetics, Baylor
College of Medicine, 1125 Moursund St. Ste. 1125, Houston, TX 77030,
USA
REFERENCE 3 (bases 1 to 7830)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..7830
/organism="CRIMIC donor vector pM37(2)"
/mol_type="other DNA"
/db_xref="taxon:2340946"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_recomb 775..874
/label=attP phage phi-C31 attachment site
/note="attP phage phi-C31 attachment site"
protein_bind 775..874
/label=phage phi-C31 attP
/bound_moiety="phage phi-C31 integrase"
/note="attachment site of phage phi-C31"
misc_recomb 931..964
/label=FRT (minimal)
/note="FRT (minimal)"
protein_bind 931..964
/label=FRT (minimal)
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="supports FLP-mediated excision but not integration
(Turan and Bode, 2011)"
misc_feature 971..1070
/label=MHC splice acceptor site
/note="MHC splice acceptor site"
misc_feature 1117..1170
/label=similar to T2A peptide
/note="similar to T2A peptide"
CDS 1117..1170
/codon_start=1
/product="2A peptide from Thosea asigna virus capsid
protein"
/label=T2A
/note="Eukaryotic ribosomes fail to insert a peptide bond
between the Gly and Pro residues, yielding separate
polypeptides."
/translation="EGRGSLLTCGDVEENPGP"
CDS 1171..3816
/codon_start=1
/product="GAL4"
/label=GAL4
/protein_id="AYC12542.1"
/translation="MKLLSSIEQACDICRLKKLKCSKEKPKCAKCLKNNWECRYSPKTK
RSPLTRAHLTEVESRLERLEQLFLLIFPREDLDMILKMDSLQDIKALLTGLFVQDNVNK
DAVTDRLASVETDMPLTLRQHRISATSSSEESSNKGQRQLTVSIDSAAHHDNSTIPLDF
MPRDALHGFDWSEEDDMSDGLPFLKTDPNNNGFFGDGSLLCILRSIGFKPENYTNSNVN
RLPTMITDRYTLASRSTTSRLLQSYLNNFHPYCPIVHSPTLMMLYNNQIEIASKDQWQI
LFNCILAIGAWCIEGESTDIDVFYYQNAKSHLTSKVFESGSIILVTALHLLSRYTQWRQ
KTNTSYNFHSFSIRMAISLGLNRDLPSSFSDSSILEQRRRIWWSVYSWEIQLSLLYGRS
IQLSQNTISFPSSVDDVQRTTTGPTIYHGIIETARLLQVFTKIYELDKTVTAEKSPICA
KKCLMICNEIEEVSRQAPKFLQMDISTTALTNLLKEHPWLSFTRFELKWKQLSLIIYVL
RDFFTNFTQKKSQLEQDQNDHQSYEVKRCSIMLSDAAQRTVMSVSSYMDNHNVTPYFAW
NCSYYLFNAVLVPIKTLLSNSKSNAENNETAQLLQQINTVLMLLKKLATFKIQTCEKYI
QVLEEVCAPFLLSQCAIPLPHISYNNSNGSAIKNIVGSATIAQYPTLPEENVNNISVKY
VSPGSVGPSPVPLKSGASFSDLVKLLSNRPPSRNSPVTIPRSTPSHRSVTPFLGQQQQL
QSLVPLTPSALFGGANFNQSGNIADSSLSFTFTNSSNGPNLITTQTNSQALSQPIASSN
VHDNFMNNEITASKIDDGNNSKPLSPGWTDQTAYNAFGITTGMFNTTTMDDVYNYLFDD
EDTPPNPKKE"
regulatory 3832..3966
/regulatory_class="polyA_signal_sequence"
/note="SV40 polyadenylation signal"
polyA_signal 3832..3966
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
regulatory 4092..4297
/regulatory_class="promoter"
/note="3XP3 promoter"
regulatory 4319..4328
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS 4325..5044
/codon_start=1
/product="enhanced GFP"
/label=enhanced GFP
/protein_id="AYC12543.1"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
ANFKIRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITLGMDELYK"
regulatory 5045..5179
/regulatory_class="polyA_signal_sequence"
/note="SV40 polyadenylation signal"
polyA_signal 5045..5179
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
misc_recomb 5287..5320
/label=FRT (minimal)
/note="FRT (minimal)"
protein_bind 5287..5320
/label=FRT (minimal)
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="supports FLP-mediated excision but not integration
(Turan and Bode, 2011)"
misc_recomb complement(5377..5476)
/label=attP phage phi-C31 attachment site
/note="attP phage phi-C31 attachment site"
protein_bind 5377..5476
/label=phage phi-C31 attP
/bound_moiety="phage phi-C31 integrase"
/note="attachment site of phage phi-C31"
primer_bind complement(5596..5612)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(5642..5660)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(5681..5697)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 5705..5721
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(5729..5759)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5774..5795
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(6083..6671)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6842..7702)
/codon_start=1
/product="AmpR"
/label=AmpR
/protein_id="AYC12544.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(7703..7807)
/gene="bla"
/label=AmpR promoter
Lee PT, Zirin J, Kanca O, Lin WW, Schulze KL, Li-Kroeger D, Tao R, Devereaux C, Hu Y, Chung V, Fang Y, He Y, Pan H, Ge M, Zuo Z, Housden BE, Mohr SE, Yamamoto S, Levis RW, Spradling AC, Perrimon N, Be
pM37(2) 载体载体图谱
pM37(2) 载体载体序列
LOCUS Exported 7830 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION CRIMIC donor vector pM37(2), complete sequence.
ACCESSION MH753012
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7830)
AUTHORS Lee PT, Zirin J, Kanca O, Lin WW, Schulze KL, Li-Kroeger D, Tao R,
Devereaux C, Hu Y, Chung V, Fang Y, He Y, Pan H, Ge M, Zuo Z,
Housden BE, Mohr SE, Yamamoto S, Levis RW, Spradling AC, Perrimon N,
Bellen HJ.
TITLE A gene-specific T2A-GAL4 library for Drosophila
JOURNAL Elife 7, e35574 (2018)
PUBMED 29565247
REFERENCE 2 (bases 1 to 7830)
AUTHORS Lee P-T., Zirin J, Kanca O, Lin W-W., Schulze KL, Li-Kroeger D, Tao
R, Devereaux C, Hu Y, Chung V, Fang Y, He Y, Pan H, Ge M, Zuo Z,
Housden BE, Mohr SE, Yamamoto S, Levis RW, Spradling AC, Perrimon N,
Bellen HJ.
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2018) HHMI, Molecular & Human Genetics, Baylor
College of Medicine, 1125 Moursund St. Ste. 1125, Houston, TX 77030,
USA
REFERENCE 3 (bases 1 to 7830)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..7830
/organism="CRIMIC donor vector pM37(2)"
/mol_type="other DNA"
/db_xref="taxon:2340946"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_recomb 775..874
/label=attP phage phi-C31 attachment site
/note="attP phage phi-C31 attachment site"
protein_bind 775..874
/label=phage phi-C31 attP
/bound_moiety="phage phi-C31 integrase"
/note="attachment site of phage phi-C31"
misc_recomb 931..964
/label=FRT (minimal)
/note="FRT (minimal)"
protein_bind 931..964
/label=FRT (minimal)
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="supports FLP-mediated excision but not integration
(Turan and Bode, 2011)"
misc_feature 971..1070
/label=MHC splice acceptor site
/note="MHC splice acceptor site"
misc_feature 1117..1170
/label=similar to T2A peptide
/note="similar to T2A peptide"
CDS 1117..1170
/codon_start=1
/product="2A peptide from Thosea asigna virus capsid
protein"
/label=T2A
/note="Eukaryotic ribosomes fail to insert a peptide bond
between the Gly and Pro residues, yielding separate
polypeptides."
/translation="EGRGSLLTCGDVEENPGP"
CDS 1171..3816
/codon_start=1
/product="GAL4"
/label=GAL4
/protein_id="AYC12542.1"
/translation="MKLLSSIEQACDICRLKKLKCSKEKPKCAKCLKNNWECRYSPKTK
RSPLTRAHLTEVESRLERLEQLFLLIFPREDLDMILKMDSLQDIKALLTGLFVQDNVNK
DAVTDRLASVETDMPLTLRQHRISATSSSEESSNKGQRQLTVSIDSAAHHDNSTIPLDF
MPRDALHGFDWSEEDDMSDGLPFLKTDPNNNGFFGDGSLLCILRSIGFKPENYTNSNVN
RLPTMITDRYTLASRSTTSRLLQSYLNNFHPYCPIVHSPTLMMLYNNQIEIASKDQWQI
LFNCILAIGAWCIEGESTDIDVFYYQNAKSHLTSKVFESGSIILVTALHLLSRYTQWRQ
KTNTSYNFHSFSIRMAISLGLNRDLPSSFSDSSILEQRRRIWWSVYSWEIQLSLLYGRS
IQLSQNTISFPSSVDDVQRTTTGPTIYHGIIETARLLQVFTKIYELDKTVTAEKSPICA
KKCLMICNEIEEVSRQAPKFLQMDISTTALTNLLKEHPWLSFTRFELKWKQLSLIIYVL
RDFFTNFTQKKSQLEQDQNDHQSYEVKRCSIMLSDAAQRTVMSVSSYMDNHNVTPYFAW
NCSYYLFNAVLVPIKTLLSNSKSNAENNETAQLLQQINTVLMLLKKLATFKIQTCEKYI
QVLEEVCAPFLLSQCAIPLPHISYNNSNGSAIKNIVGSATIAQYPTLPEENVNNISVKY
VSPGSVGPSPVPLKSGASFSDLVKLLSNRPPSRNSPVTIPRSTPSHRSVTPFLGQQQQL
QSLVPLTPSALFGGANFNQSGNIADSSLSFTFTNSSNGPNLITTQTNSQALSQPIASSN
VHDNFMNNEITASKIDDGNNSKPLSPGWTDQTAYNAFGITTGMFNTTTMDDVYNYLFDD
EDTPPNPKKE"
regulatory 3832..3966
/regulatory_class="polyA_signal_sequence"
/note="SV40 polyadenylation signal"
polyA_signal 3832..3966
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
regulatory 4092..4297
/regulatory_class="promoter"
/note="3XP3 promoter"
regulatory 4319..4328
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS 4325..5044
/codon_start=1
/product="enhanced GFP"
/label=enhanced GFP
/protein_id="AYC12543.1"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
ANFKIRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITLGMDELYK"
regulatory 5045..5179
/regulatory_class="polyA_signal_sequence"
/note="SV40 polyadenylation signal"
polyA_signal 5045..5179
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
misc_recomb 5287..5320
/label=FRT (minimal)
/note="FRT (minimal)"
protein_bind 5287..5320
/label=FRT (minimal)
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="supports FLP-mediated excision but not integration
(Turan and Bode, 2011)"
misc_recomb complement(5377..5476)
/label=attP phage phi-C31 attachment site
/note="attP phage phi-C31 attachment site"
protein_bind 5377..5476
/label=phage phi-C31 attP
/bound_moiety="phage phi-C31 integrase"
/note="attachment site of phage phi-C31"
primer_bind complement(5596..5612)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(5642..5660)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(5681..5697)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 5705..5721
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(5729..5759)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5774..5795
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(6083..6671)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6842..7702)
/codon_start=1
/product="AmpR"
/label=AmpR
/protein_id="AYC12544.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(7703..7807)
/gene="bla"
/label=AmpR promoter