LOCUS Exported 9650 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Lentivirus shuttle vector pLV.FLPe.PurR, complete sequence.
ACCESSION GU253314
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9650)
AUTHORS Goncalves MA, Janssen JM, Holkers M, de Vries AA.
TITLE Rapid and sensitive lentivirus vector-based conditional gene
expression assay to monitor and quantify cell fusion activity
JOURNAL PLoS ONE 5 (6), E10954 (2010)
PUBMED 20532169
REFERENCE 2 (bases 1 to 9650)
AUTHORS Goncalves MAF.V., Janssen JM, Holkers M, de Vries AAF.V.
TITLE Direct Submission
JOURNAL Submitted (01-DEC-2009) Molecular Cell Biology, Leiden University
Medical Center, Einthovenweg 20, Leiden, Zuid Holland 2333 ZC, The
Netherlands
REFERENCE 3 (bases 1 to 9650)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..9650
/organism="Lentivirus shuttle vector pLV.FLPe.PurR"
/mol_type="other DNA"
/note="derived from HIV-1 and FLPe (enhanced version of the
Saccharomyces cerevisiae site-specific recombinase FLP)"
/db_xref="taxon:715478"
repeat_region 1..410
/note="hybrid 5 LTR derived from Rous sarcoma virus and
HIV-1 LTR sequences"
promoter 3..229
/label=RSV promoter
/note="Rous sarcoma virus enhancer/promoter"
LTR 230..410
/label=5 LTR (truncated)
/note="truncated 5 long terminal repeat (LTR) from HIV-1"
misc_feature 454..579
/label=HIV-1 Psi
/note="packaging signal of human immunodeficiency virus
type 1"
regulatory 459..598
/regulatory_class="other"
/note="HIV-1 packaging signal"
misc_feature 925..1781
/label=Rev-responsive element (RRE)
/note="Rev-responsive element (RRE)"
misc_feature 1072..1305
/label=RRE
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
misc_feature 1795..1912
/label=complementary polypurine tract (cPPT)
/note="complementary polypurine tract (cPPT)"
regulatory 1926..2549
/regulatory_class="promoter"
/note="immediate-early cytomegalovirus (IE-CMV) gene
promoter"
enhancer 1935..2238
/label=CMV enhancer
/note="human cytomegalovirus immediate early enhancer"
promoter 2239..2442
/label=CMV promoter
/note="human cytomegalovirus (CMV) immediate early
promoter"
CDS 2577..3875
/codon_start=1
/product="nls/FLPe fusion protein"
/label=nls/FLPe fusion protein
/note="nls.FLPe; FLPe is an enhanced (thermostable) version
of the Saccharomyces cerevisiae site-specific recombinase
FLP; fusion protein contains at its N-terminus
corresponding to the SV40 large T antigen nls;
site-specific recombinase"
/protein_id="ADC44104.1"
/translation="MAPKKKRKVMSQFDILCKTPPKVLVRQFVERFERPSGEKIASCAA
ELTYLCWMITHNGTAIKRATFMSYNTIISNSLSFDIVNKSLQFKYKTQKATILEASLKK
LIPAWEFTIIPYNGQKHQSDITDIVSSLQLQFESSEEADKGNSHSKKMLKALLSEGESI
WEITEKILNSFEYTSRFTKTKTLYQFLFLATFINCGRFSDIKNVDPKSFKLVQNKYLGV
IIQCLVTETKTSVSRHIYFFSARGRIDPLVYLDEFLRNSEPVLKRVNRTGNSSSNKQEY
QLLKDNLVRSYNKALKKNAPYPIFAIKNGPKSHIGRHLMTSFLSMKGLTELTNVVGNWS
DKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPIEEWQHIEQL
KGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI"
misc_feature 4069..4646
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus"
misc_feature 4069..4641
/label=IRES
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
misc_feature 4092..4643
/label=IRES
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 4674..5273
/codon_start=1
/gene="pac"
/product="puromycin N-acetyltransferase"
/label=pac
/note="puromycin-resistance protein; N-acetyltransferase;
derived from Streptomyces alboniger"
/protein_id="ADC44105.1"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
gene 4674..5273
/gene="pac"
/label=pac
misc_feature 5323..6075
/note="Homo sapiens hepatitis B virus posttranscriptional
regulatory element"
repeat_region 6165..6398
/label=self-inactivating 3 LTR
/note="self-inactivating 3 LTR"
LTR 6165..6398
/label=3 LTR (Delta-U3)
/note="self-inactivating 3 long terminal repeat (LTR) from
HIV-1"
polyA_signal 6470..6591
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
rep_origin 6631..6766
/label=SV40 ori
/note="SV40 origin of replication"
promoter complement(6787..6805)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(6815..6831)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 6976..7431
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 7460..7564
/gene="bla"
/label=AmpR promoter
CDS 7565..8425
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/note="prokaryotic ampicillin resistance protein"
/protein_id="ADC44106.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 8596..9184
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 9472..9493
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 9508..9538
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 9546..9562
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 9570..9586
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 9607..9625
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
LOCUS Exported 9650 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Lentivirus shuttle vector pLV.FLPe.PurR, complete sequence.
ACCESSION GU253314
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9650)
AUTHORS Goncalves MA, Janssen JM, Holkers M, de Vries AA.
TITLE Rapid and sensitive lentivirus vector-based conditional gene
expression assay to monitor and quantify cell fusion activity
JOURNAL PLoS ONE 5 (6), E10954 (2010)
PUBMED 20532169
REFERENCE 2 (bases 1 to 9650)
AUTHORS Goncalves MAF.V., Janssen JM, Holkers M, de Vries AAF.V.
TITLE Direct Submission
JOURNAL Submitted (01-DEC-2009) Molecular Cell Biology, Leiden University
Medical Center, Einthovenweg 20, Leiden, Zuid Holland 2333 ZC, The
Netherlands
REFERENCE 3 (bases 1 to 9650)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..9650
/organism="Lentivirus shuttle vector pLV.FLPe.PurR"
/mol_type="other DNA"
/note="derived from HIV-1 and FLPe (enhanced version of the
Saccharomyces cerevisiae site-specific recombinase FLP)"
/db_xref="taxon:715478"
repeat_region 1..410
/note="hybrid 5 LTR derived from Rous sarcoma virus and
HIV-1 LTR sequences"
promoter 3..229
/label=RSV promoter
/note="Rous sarcoma virus enhancer/promoter"
LTR 230..410
/label=5 LTR (truncated)
/note="truncated 5 long terminal repeat (LTR) from HIV-1"
misc_feature 454..579
/label=HIV-1 Psi
/note="packaging signal of human immunodeficiency virus
type 1"
regulatory 459..598
/regulatory_class="other"
/note="HIV-1 packaging signal"
misc_feature 925..1781
/label=Rev-responsive element (RRE)
/note="Rev-responsive element (RRE)"
misc_feature 1072..1305
/label=RRE
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
misc_feature 1795..1912
/label=complementary polypurine tract (cPPT)
/note="complementary polypurine tract (cPPT)"
regulatory 1926..2549
/regulatory_class="promoter"
/note="immediate-early cytomegalovirus (IE-CMV) gene
promoter"
enhancer 1935..2238
/label=CMV enhancer
/note="human cytomegalovirus immediate early enhancer"
promoter 2239..2442
/label=CMV promoter
/note="human cytomegalovirus (CMV) immediate early
promoter"
CDS 2577..3875
/codon_start=1
/product="nls/FLPe fusion protein"
/label=nls/FLPe fusion protein
/note="nls.FLPe; FLPe is an enhanced (thermostable) version
of the Saccharomyces cerevisiae site-specific recombinase
FLP; fusion protein contains at its N-terminus
corresponding to the SV40 large T antigen nls;
site-specific recombinase"
/protein_id="ADC44104.1"
/translation="MAPKKKRKVMSQFDILCKTPPKVLVRQFVERFERPSGEKIASCAA
ELTYLCWMITHNGTAIKRATFMSYNTIISNSLSFDIVNKSLQFKYKTQKATILEASLKK
LIPAWEFTIIPYNGQKHQSDITDIVSSLQLQFESSEEADKGNSHSKKMLKALLSEGESI
WEITEKILNSFEYTSRFTKTKTLYQFLFLATFINCGRFSDIKNVDPKSFKLVQNKYLGV
IIQCLVTETKTSVSRHIYFFSARGRIDPLVYLDEFLRNSEPVLKRVNRTGNSSSNKQEY
QLLKDNLVRSYNKALKKNAPYPIFAIKNGPKSHIGRHLMTSFLSMKGLTELTNVVGNWS
DKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPIEEWQHIEQL
KGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI"
misc_feature 4069..4646
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus"
misc_feature 4069..4641
/label=IRES
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
misc_feature 4092..4643
/label=IRES
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 4674..5273
/codon_start=1
/gene="pac"
/product="puromycin N-acetyltransferase"
/label=pac
/note="puromycin-resistance protein; N-acetyltransferase;
derived from Streptomyces alboniger"
/protein_id="ADC44105.1"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
gene 4674..5273
/gene="pac"
/label=pac
misc_feature 5323..6075
/note="Homo sapiens hepatitis B virus posttranscriptional
regulatory element"
repeat_region 6165..6398
/label=self-inactivating 3 LTR
/note="self-inactivating 3 LTR"
LTR 6165..6398
/label=3 LTR (Delta-U3)
/note="self-inactivating 3 long terminal repeat (LTR) from
HIV-1"
polyA_signal 6470..6591
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
rep_origin 6631..6766
/label=SV40 ori
/note="SV40 origin of replication"
promoter complement(6787..6805)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(6815..6831)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 6976..7431
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 7460..7564
/gene="bla"
/label=AmpR promoter
CDS 7565..8425
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/note="prokaryotic ampicillin resistance protein"
/protein_id="ADC44106.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 8596..9184
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 9472..9493
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 9508..9538
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 9546..9562
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 9570..9586
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 9607..9625
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"