LOCUS Exported 5321 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pLD601 DNA, complete sequence.
ACCESSION AB199889
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5321)
AUTHORS Tomizawa K, Takase A, Kanamoto H.
TITLE A system for expressing GFP protein using plants
JOURNAL Published Only in Database (2005)
REFERENCE 2 (bases 1 to 5321)
AUTHORS Tomizawa K, Takase A, Kanamoto H.
TITLE Direct Submission
JOURNAL Submitted (18-JAN-2005) Hirosuke Kanamoto, Research Institute of
Innovative Technology for the Earth, Plant research group; 9-2
Kizugawadai, Kizu-cho, Kyoto 619-0292, Japan
(E-mail:kanamoto@rite.or.jp, Tel:81-774-75-2307, Fax:81-774-75-2320)
REFERENCE 3 (bases 1 to 5321)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5321
/organism="Expression vector pLD601"
/mol_type="other DNA"
/db_xref="taxon:309977"
promoter 24..128
/gene="bla"
/label=AmpR promoter
CDS 129..989
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 1160..1748
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2036..2057
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2072..2102
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2110..2126
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2134..2150
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 2171..2189
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
regulatory 2226..2338
/regulatory_class="promoter"
/note="tobacco rrn promoter"
CDS 2374..3168
/codon_start=1
/gene="aadA"
/product="aminoglycoside 3-adenylyltransferase"
/label=aadA
/protein_id="BAE47518.1"
/translation="MAREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKP
HSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPA
KRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDL
FEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQ
PVILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
gene 2374..3168
/gene="aadA"
/label=aadA
regulatory 3573..3703
/regulatory_class="promoter"
/note="tobacco psbA promoter"
RBS 3707..3718
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
CDS 3725..4441
/codon_start=1
/gene="gfp"
/product="green fluorescent protein"
/label=gfp
/protein_id="BAE47519.1"
/translation="MRKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
gene 3725..4441
/gene="gfp"
/label=gfp
promoter complement(4678..4696)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(4706..4722)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 4864..5319
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
LOCUS Exported 5321 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pLD601 DNA, complete sequence.
ACCESSION AB199889
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5321)
AUTHORS Tomizawa K, Takase A, Kanamoto H.
TITLE A system for expressing GFP protein using plants
JOURNAL Published Only in Database (2005)
REFERENCE 2 (bases 1 to 5321)
AUTHORS Tomizawa K, Takase A, Kanamoto H.
TITLE Direct Submission
JOURNAL Submitted (18-JAN-2005) Hirosuke Kanamoto, Research Institute of
Innovative Technology for the Earth, Plant research group; 9-2
Kizugawadai, Kizu-cho, Kyoto 619-0292, Japan
(E-mail:kanamoto@rite.or.jp, Tel:81-774-75-2307, Fax:81-774-75-2320)
REFERENCE 3 (bases 1 to 5321)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5321
/organism="Expression vector pLD601"
/mol_type="other DNA"
/db_xref="taxon:309977"
promoter 24..128
/gene="bla"
/label=AmpR promoter
CDS 129..989
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 1160..1748
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2036..2057
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2072..2102
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2110..2126
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2134..2150
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 2171..2189
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
regulatory 2226..2338
/regulatory_class="promoter"
/note="tobacco rrn promoter"
CDS 2374..3168
/codon_start=1
/gene="aadA"
/product="aminoglycoside 3-adenylyltransferase"
/label=aadA
/protein_id="BAE47518.1"
/translation="MAREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKP
HSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPA
KRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDL
FEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQ
PVILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
gene 2374..3168
/gene="aadA"
/label=aadA
regulatory 3573..3703
/regulatory_class="promoter"
/note="tobacco psbA promoter"
RBS 3707..3718
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
CDS 3725..4441
/codon_start=1
/gene="gfp"
/product="green fluorescent protein"
/label=gfp
/protein_id="BAE47519.1"
/translation="MRKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
gene 3725..4441
/gene="gfp"
/label=gfp
promoter complement(4678..4696)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(4706..4722)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 4864..5319
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"