| 载体基本信息 |
| 载体名称 |
pKU1021gps |
载体长度 |
7308 bp |
| 载体类型 |
Expression vector |
载体来源 |
Yamada Y, Kuzuyama T, Komatsu M, Shin-Ya K, Omura S, Cane DE, Ikeda H. |
pKU1021gps 载体载体图谱
pKU1021gps 载体载体序列
LOCUS Exported 7308 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pKU1021gps DNA, complete sequence.
ACCESSION AB982124
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7308)
AUTHORS Yamada Y, Kuzuyama T, Komatsu M, Shin-Ya K, Omura S, Cane DE, Ikeda
H.
TITLE Terpene synthases are widely distributed in bacteria
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 112 (3), 857-862 (2015)
PUBMED 25535391
REFERENCE 2 (bases 1 to 7308)
AUTHORS Ikeda H.
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2014) Contact:Haruo Ikeda Kitasato University,
Kitasato Institute for Life Sciences; 1-15-1 Kitasato, Sagamihara,
Kanagawa 252-0373, Japan URL :http://avermitilis.ls.kitasato-u.ac.jp
REFERENCE 3 (bases 1 to 7308)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7308
/organism="Expression vector pKU1021gps"
/mol_type="other DNA"
/db_xref="taxon:1535211"
CDS 344..1138
/codon_start=1
/gene="aphII"
/product="aminoglycoside phosphotransferase"
/label=aphII
/protein_id="BAP82231.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
gene 344..1138
/gene="aphII"
/label=aphII
oriT 1476..1585
/note="incP origin of transfer"
oriT 1479..1585
/label=oriT of RK2
/note="oriT of RK2"
CDS complement(1639..1650)
/codon_start=1
/product="Factor Xa recognition and cleavage site"
/label=Factor Xa site
/translation="IEGR"
protein_bind 1721..1820
/label=phage phi-C31 attP
/bound_moiety="phage phi-C31 integrase"
/note="attachment site of phage phi-C31"
misc_recomb 1751..1791
/gene="attP"
/note="attachment site; from bacteriophage phiC31"
gene 1751..1791
/gene="attP"
/label=attP
CDS 1806..3647
/codon_start=1
/gene="int_phiC31"
/product="integrase"
/label=int_phiC31
/note="from bacteriophage phiC31"
/protein_id="BAP82232.1"
/translation="MTQGVVTGVDTYAGAYDRQSRERENSSAASPATQRSANEDKAADL
QREVERDGGRFRFVGHFSEAPGTSAFGTAERPEFERILNECRAGRLNMIIVYDVSRFSR
LKVMDAIPIVSELLALGVTIVSTQEGVFRQGNVMDLIHLIMRLDASHKESSLKSAKILD
TKNLQRELGGYVGGKAPYGFELVSETKEITRNGRMVNVVINKLAHSTTPLTGPFEFEPD
VIRWWWREIKTHKHLPFKPGSQAAIHPGSITGLCKRMDADAVPTRGETIGKKTASSAWD
PATVMRILRDPRIAGFAAEVIYKKKPDGTPTTKIEGYRIQRDPITLRPVELDCGPIIEP
AEWYELQAWLDGRGRGKGLSRGQAILSAMDKLYCECGAVMTSKRGEESIKDSYRCRRRK
VVDPSAPGQHEGTCNVSMAALDKFVAERIFNKIRHAEGDEETLALLWEAARRFGKLTEA
PEKSGERANLVAERADALNALEELYEDRAAGAYDGPVGRKHFRKQQAALTLRQQGAEER
LAELEAAEAPKLPLDQWFPEDADADPTGPKSWWGRASVDDKRVFVGLFVDKIVVTKSTT
GRGQGTPIEKRASITWAKPPTDDDEDDAQDGTEDVAA"
gene 1806..3647
/gene="int_phiC31"
/label=int_phiC31
CDS 1830..3647
/codon_start=1
/product="integrase from phage phi-C31"
/label=phage phi-C31 integrase
/translation="MDTYAGAYDRQSRERENSSAASPATQRSANEDKAADLQREVERDG
GRFRFVGHFSEAPGTSAFGTAERPEFERILNECRAGRLNMIIVYDVSRFSRLKVMDAIP
IVSELLALGVTIVSTQEGVFRQGNVMDLIHLIMRLDASHKESSLKSAKILDTKNLQREL
GGYVGGKAPYGFELVSETKEITRNGRMVNVVINKLAHSTTPLTGPFEFEPDVIRWWWRE
IKTHKHLPFKPGSQAAIHPGSITGLCKRMDADAVPTRGETIGKKTASSAWDPATVMRIL
RDPRIAGFAAEVIYKKKPDGTPTTKIEGYRIQRDPITLRPVELDCGPIIEPAEWYELQA
WLDGRGRGKGLSRGQAILSAMDKLYCECGAVMTSKRGEESIKDSYRCRRRKVVDPSAPG
QHEGTCNVSMAALDKFVAERIFNKIRHAEGDEETLALLWEAARRFGKLTEAPEKSGERA
NLVAERADALNALEELYEDRAAGAYDGPVGRKHFRKQQAALTLRQQGAEERLAELEAAE
APKLPLDQWFPEDADADPTGPKSWWGRASVDDKRVFVGLFVDKIVVTKSTTGRGQGTPI
EKRASITWAKPPTDDDEDDAQDGTEDVAA"
rep_origin 3867..4455
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
rep_origin 4047..4455
/label=pMB1 replication origin
/note="pMB1 replication origin"
protein_bind 4743..4764
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 4779..4809
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4817..4833
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 4841..4857
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS complement(4900..5967)
/codon_start=1
/gene="gps"
/product="geranyl diphosphate synthase"
/label=gps
/note="from Streptomyces sp."
/protein_id="BAP82233.1"
/translation="MTPDVTNDASQETVDLVRRTSADLLRRVEARIQSLLSAGHDTWAA
VDERAVVPIDALAELMASGGKRIRPAFCIAGHLAAGGDPDDSGVVAAGAALEMLHASLL
VHDDILDDSSQRRGLPTVHAKHTALHQDLGWQGESRRFGEGVGLLVGGLALTYADELMC
EAPATAIAEWNKLRSEVLIGQYMDVVAAAEFSVDPRLSRLIAVIKSGRYTIHRPLVIGA
NVAGRTDLDAAFAEYGEAVGEAFQLRDDLLDAFGDSAATGKPAGLDFTQHKMTLLLGWA
MQRDESIRALITEPGHSADDVRRHLLDTKVPDDVEQHIAGLVERGCKAITDAPIAPVWR
EELMEMANRVAYRDA"
gene complement(4900..5967)
/gene="gps"
/label=gps
regulatory complement(5971..6517)
/regulatory_class="promoter"
/gene="rpsJp"
/note="promoter of gene encoding ribosomal protein S10;
from Streptomyces avermitilis MA-4680"
gene complement(5971..6517)
/gene="rpsJp"
/label=rpsJp
promoter 6522..6550
/gene="intI1 (promoter lies within the coding sequence)"
/label=Pc promoter
/note="class 1 integron promoter"
CDS 6739..7272
/codon_start=1
/gene="aac(3)I"
/product="aminoglycoside acetyltransferase"
/label=aac(3)I
/protein_id="BAP82234.1"
/translation="MLRSSNDVTQQGSRPKTKLGGSSMGIIRTCRLGPDQVKSMRAALD
LFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPRFEQPRS
EIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGIR
EEVMHFDIDPSTAT"
gene 6739..7272
/gene="aac(3)I"
/label=aac(3)I