Spagnolo J, Bigot S, Denis Y, Bordi C, de Bentzmann S.
pKNG202 载体载体图谱
pKNG202 载体载体序列
LOCUS Exported 6671 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Shuttle vector pKNG202, complete sequence.
ACCESSION JQ282797
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6671)
AUTHORS Spagnolo J, Bigot S, Denis Y, Bordi C, de Bentzmann S.
TITLE Development of a genetic tool for activating chromosomal expression
of cryptic or tightly regulated loci in Pseudomonas aeruginosa
JOURNAL Plasmid (2011) In press
PUBMED 22212534
REFERENCE 2 (bases 1 to 6671)
AUTHORS Spagnolo J, Bigot S, Bordi C, de Bentzmann S.
TITLE Direct Submission
JOURNAL Submitted (14-DEC-2011) Institut de Microbiologie de la
Mediterrannee, UMR 7255 Aix-Marseille University, 31 chemin Joseph
Aiguier, Marseille, Bouches du Rhone 13402, France
REFERENCE 3 (bases 1 to 6671)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6671
/organism="Shuttle vector pKNG202"
/mol_type="other DNA"
/label=derived from vector pKNG101
/PCR_primers="fwd_name: upkn, fwd_seq:
ccctggatttcactgatgag, rev_name: rpkn, rev_seq:
catatcacaacgtgcgtgga"
/note="derived from vector pKNG101"
/db_xref="taxon:1165853"
promoter 141..169
/label=tet promoter
/note="E. coli promoter for tetracycline efflux protein
gene"
CDS 693..1184
/codon_start=1
/gene="strA"
/product="StrA"
/function="selection marker for integration"
/label=strA
/protein_id="AFF18865.1"
/translation="MGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPD
EDKSTPLHDLLARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRL
GTADRYADLALMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG
"
gene 693..1184
/gene="strA"
/label=strA
CDS 1184..2020
/codon_start=1
/gene="strB"
/product="StrB"
/function="selection marker for integration"
/label=strB
/protein_id="AFF18866.1"
/translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKP
IEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATEIA
AELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMMSNA
SELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIA
QMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY"
gene 1184..2020
/gene="strB"
/label=strB
rep_origin 2050..2444
/note="origin of replication of plasmid R6K (defective pir
gene)"
rep_origin 2056..2444
/label=R6K gamma ori
/note="gamma replication origin from E. coli plasmid R6K;
requires the R6K initiator protein pi for replication"
rep_origin 3162..3272
/label=RK6 conjugational DNA transfer origin
/note="RK6 conjugational DNA transfer origin"
oriT 3164..3273
/note="incP origin of transfer"
mobile_element 3886..4186
/mobile_element_type="insertion sequence:IS1"
/note="from Escherichia coli"
CDS complement(4327..5748)
/codon_start=1
/gene="sacB"
/product="SacB"
/label=sacB
/note="from Bacillus subtilis levansucrase"
/protein_id="AFF18867.1"
/translation="MNIKKFAKQATVLTFTTALLAGGATQAFAKETNQKPYKETYGISH
ITRHDMLQIPEQQKNEKYQVPEFDSSTIKNISSAKGLDVWDSWPLQNADGTVANYHGYH
IVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEW
SGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDG
KTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTEDGYQGEESLFNKA
YYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKPLIASNTVTDE
IERANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLNKTGLVLK
MDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYADKQSTFAPSFLLNIKGKKTSV
VKDSILEQGQLTVNK"
gene complement(4327..5748)
/gene="sacB"
/label=sacB
promoter complement(5749..6194)
/gene="sacR"
/label=sacB promoter
/note="sacB promoter and control region"
misc_feature 6255..6654
/label=cos
/note="lambda cos site; allows packaging into phage lambda
particles"
Spagnolo J, Bigot S, Denis Y, Bordi C, de Bentzmann S.
pKNG202 载体载体图谱
pKNG202 载体载体序列
LOCUS Exported 6671 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Shuttle vector pKNG202, complete sequence.
ACCESSION JQ282797
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6671)
AUTHORS Spagnolo J, Bigot S, Denis Y, Bordi C, de Bentzmann S.
TITLE Development of a genetic tool for activating chromosomal expression
of cryptic or tightly regulated loci in Pseudomonas aeruginosa
JOURNAL Plasmid (2011) In press
PUBMED 22212534
REFERENCE 2 (bases 1 to 6671)
AUTHORS Spagnolo J, Bigot S, Bordi C, de Bentzmann S.
TITLE Direct Submission
JOURNAL Submitted (14-DEC-2011) Institut de Microbiologie de la
Mediterrannee, UMR 7255 Aix-Marseille University, 31 chemin Joseph
Aiguier, Marseille, Bouches du Rhone 13402, France
REFERENCE 3 (bases 1 to 6671)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6671
/organism="Shuttle vector pKNG202"
/mol_type="other DNA"
/label=derived from vector pKNG101
/PCR_primers="fwd_name: upkn, fwd_seq:
ccctggatttcactgatgag, rev_name: rpkn, rev_seq:
catatcacaacgtgcgtgga"
/note="derived from vector pKNG101"
/db_xref="taxon:1165853"
promoter 141..169
/label=tet promoter
/note="E. coli promoter for tetracycline efflux protein
gene"
CDS 693..1184
/codon_start=1
/gene="strA"
/product="StrA"
/function="selection marker for integration"
/label=strA
/protein_id="AFF18865.1"
/translation="MGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPD
EDKSTPLHDLLARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRL
GTADRYADLALMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG
"
gene 693..1184
/gene="strA"
/label=strA
CDS 1184..2020
/codon_start=1
/gene="strB"
/product="StrB"
/function="selection marker for integration"
/label=strB
/protein_id="AFF18866.1"
/translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKP
IEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATEIA
AELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMMSNA
SELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIA
QMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY"
gene 1184..2020
/gene="strB"
/label=strB
rep_origin 2050..2444
/note="origin of replication of plasmid R6K (defective pir
gene)"
rep_origin 2056..2444
/label=R6K gamma ori
/note="gamma replication origin from E. coli plasmid R6K;
requires the R6K initiator protein pi for replication"
rep_origin 3162..3272
/label=RK6 conjugational DNA transfer origin
/note="RK6 conjugational DNA transfer origin"
oriT 3164..3273
/note="incP origin of transfer"
mobile_element 3886..4186
/mobile_element_type="insertion sequence:IS1"
/note="from Escherichia coli"
CDS complement(4327..5748)
/codon_start=1
/gene="sacB"
/product="SacB"
/label=sacB
/note="from Bacillus subtilis levansucrase"
/protein_id="AFF18867.1"
/translation="MNIKKFAKQATVLTFTTALLAGGATQAFAKETNQKPYKETYGISH
ITRHDMLQIPEQQKNEKYQVPEFDSSTIKNISSAKGLDVWDSWPLQNADGTVANYHGYH
IVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEW
SGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDG
KTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTEDGYQGEESLFNKA
YYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKPLIASNTVTDE
IERANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLNKTGLVLK
MDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYADKQSTFAPSFLLNIKGKKTSV
VKDSILEQGQLTVNK"
gene complement(4327..5748)
/gene="sacB"
/label=sacB
promoter complement(5749..6194)
/gene="sacR"
/label=sacB promoter
/note="sacB promoter and control region"
misc_feature 6255..6654
/label=cos
/note="lambda cos site; allows packaging into phage lambda
particles"