Bardaji L, Anorga M, Ruiz-Maso JA, Del Solar G, Murillo J.
pKMAG-C 载体载体图谱
pKMAG-C 载体载体序列
LOCUS Exported 4319 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pKMAG-C, complete sequence.
ACCESSION KX714577
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4319)
AUTHORS Bardaji L, Anorga M, Ruiz-Maso JA, Del Solar G, Murillo J.
TITLE Plasmid replicons from Pseudomonas are natural chimeras of
functional, exchangeable modules
JOURNAL Front Microbiol (2017) In press
REFERENCE 2 (bases 1 to 4319)
AUTHORS Anorga M, Bardaji L, Murillo J.
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2016) Departamento de Produccion Agraria,
Universidad Publica de Navarra, Campus de Arrosadia, Pamplona 31006,
Spain
REFERENCE 3 (bases 1 to 4319)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4319
/organism="Cloning vector pKMAG-C"
/mol_type="other DNA"
/db_xref="taxon:1940342"
misc_feature join(1..46,2324..4319)
/note="derived from pK184; GI:392879"
misc_feature 55..1795
/note="derived from pPsv48C (FR820587), containing the
replicase gene, repA; GI:410686395"
CDS 368..1681
/codon_start=1
/gene="repA"
/product="RepA"
/label=repA
/note="replication initiator protein YP_006962014"
/protein_id="APZ73802.1"
/translation="MRPDHAISLAIATSPTANADPLASSTHLPPARFFEDGTALNRLLL
EAPYMARCSDDKTATRVRPREYALRYPYMQVNRPGMVSWLVFDLDHANALAWDDAGLPA
PNLMVRNRKSGHSQLFYAVPSVCTTENARAKPIQYMKAIYAAFAARLDADVDYHGGPVA
KTPGHPWWETTEFHSHVYELGELASAVELTVKPWATGPKLDQVSHSRHCILFELLRYFA
YSIVNRERELGSFESFMRSLDAYAYNHNSFLKQGFSENLPLSSIRATVKSVGRWTWDRY
TGDRRCHRGAMQLNSSLSLTERQSLAAKRTHELRHKATESKIRAACRQLQDQGKALVRS
AIAALAGVSASTVARYAHILSEVTKPATVSVLKVSADERPTVTPGDQAAPREAVQCLKK
QAMTDRDQGVSYAVHQISAVPQGPQAGESLKTEHEDGS"
gene 368..1681
/gene="repA"
/label=repA
misc_feature 1816..2262
/note="derived from pMe6041; GI:4378794"
regulatory 1866..2132
/regulatory_class="terminator"
/note="T4 transcription terminator"
misc_feature 2134..2244
/label=multiple cloning site
/note="multiple cloning site"
regulatory 2287..2296
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
regulatory 2291..2300
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS 2618..3412
/codon_start=1
/gene="kan"
/product="kanamycin phosphotransferase"
/label=kan
/note="kanamycin resistance"
/protein_id="APZ73803.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
gene 2618..3412
/gene="kan"
/label=kan
rep_origin 3558..4103
/direction=RIGHT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
Bardaji L, Anorga M, Ruiz-Maso JA, Del Solar G, Murillo J.
pKMAG-C 载体载体图谱
pKMAG-C 载体载体序列
LOCUS Exported 4319 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pKMAG-C, complete sequence.
ACCESSION KX714577
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4319)
AUTHORS Bardaji L, Anorga M, Ruiz-Maso JA, Del Solar G, Murillo J.
TITLE Plasmid replicons from Pseudomonas are natural chimeras of
functional, exchangeable modules
JOURNAL Front Microbiol (2017) In press
REFERENCE 2 (bases 1 to 4319)
AUTHORS Anorga M, Bardaji L, Murillo J.
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2016) Departamento de Produccion Agraria,
Universidad Publica de Navarra, Campus de Arrosadia, Pamplona 31006,
Spain
REFERENCE 3 (bases 1 to 4319)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4319
/organism="Cloning vector pKMAG-C"
/mol_type="other DNA"
/db_xref="taxon:1940342"
misc_feature join(1..46,2324..4319)
/note="derived from pK184; GI:392879"
misc_feature 55..1795
/note="derived from pPsv48C (FR820587), containing the
replicase gene, repA; GI:410686395"
CDS 368..1681
/codon_start=1
/gene="repA"
/product="RepA"
/label=repA
/note="replication initiator protein YP_006962014"
/protein_id="APZ73802.1"
/translation="MRPDHAISLAIATSPTANADPLASSTHLPPARFFEDGTALNRLLL
EAPYMARCSDDKTATRVRPREYALRYPYMQVNRPGMVSWLVFDLDHANALAWDDAGLPA
PNLMVRNRKSGHSQLFYAVPSVCTTENARAKPIQYMKAIYAAFAARLDADVDYHGGPVA
KTPGHPWWETTEFHSHVYELGELASAVELTVKPWATGPKLDQVSHSRHCILFELLRYFA
YSIVNRERELGSFESFMRSLDAYAYNHNSFLKQGFSENLPLSSIRATVKSVGRWTWDRY
TGDRRCHRGAMQLNSSLSLTERQSLAAKRTHELRHKATESKIRAACRQLQDQGKALVRS
AIAALAGVSASTVARYAHILSEVTKPATVSVLKVSADERPTVTPGDQAAPREAVQCLKK
QAMTDRDQGVSYAVHQISAVPQGPQAGESLKTEHEDGS"
gene 368..1681
/gene="repA"
/label=repA
misc_feature 1816..2262
/note="derived from pMe6041; GI:4378794"
regulatory 1866..2132
/regulatory_class="terminator"
/note="T4 transcription terminator"
misc_feature 2134..2244
/label=multiple cloning site
/note="multiple cloning site"
regulatory 2287..2296
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
regulatory 2291..2300
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS 2618..3412
/codon_start=1
/gene="kan"
/product="kanamycin phosphotransferase"
/label=kan
/note="kanamycin resistance"
/protein_id="APZ73803.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
gene 2618..3412
/gene="kan"
/label=kan
rep_origin 3558..4103
/direction=RIGHT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."