LOCUS Exported 3934 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pKEx4tr, complete sequence.
ACCESSION AF044029
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3934)
AUTHORS Mindrinos M, Katagiri F, Yu GL, Ausubel FM.
TITLE The A. thaliana disease resistance gene RPS2 encodes a protein
containing a nucleotide-binding site and leucine-rich repeats
JOURNAL Cell 78 (6), 1089-1099 (1994)
PUBMED 7923358
REFERENCE 2 (bases 1 to 3934)
AUTHORS Katagiri F, Yuan F, Ausubel FM.
TITLE A plant cDNA expression vector carrying a modified version of the
cauliflower mosaic virus 35S promoter that has a reduced activity in
bacteria
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 3934)
AUTHORS Katagiri F, Ausubel FM.
TITLE Direct Submission
JOURNAL Submitted (21-JAN-1998) Biological Sciences, University of Maryland
Baltimore County, 1000 Hilltop Circle, Baltimore, MD 21250, USA
REFERENCE 4 (bases 1 to 3934)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3934
/organism="Expression vector pKEx4tr"
/mol_type="genomic DNA"
/label=derived from pUC18 vector
/note="derived from pUC18 vector"
/db_xref="taxon:72436"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 417..1305
/regulatory_class="promoter"
/note="modified cauliflower mosaic virus 35S promoter"
terminator 1199..1245
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
regulatory 1312..1334
/regulatory_class="promoter"
/note="T7 promoter"
promoter 1312..1330
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 1335..1389
/note="multiple cloning site; contains unique restriction
sites for PmeI, SalI, EcoRI, BamHI, XhoI, NotI, SacII, and
SacI"
regulatory complement(1401..1420)
/regulatory_class="promoter"
/note="T3 promoter"
promoter complement(1402..1420)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
regulatory 1437..1690
/regulatory_class="terminator"
/note="3 end of nopalin synthase gene"
terminator 1437..1689
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
misc_feature 1704..404
/label=similar to pUC18 vector
/note="similar to pUC18 vector"
primer_bind complement(1713..1729)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1737..1753
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1761..1791)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1806..1827
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2115..2703)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2874..3734)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(3735..3839)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 3934 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pKEx4tr, complete sequence.
ACCESSION AF044029
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3934)
AUTHORS Mindrinos M, Katagiri F, Yu GL, Ausubel FM.
TITLE The A. thaliana disease resistance gene RPS2 encodes a protein
containing a nucleotide-binding site and leucine-rich repeats
JOURNAL Cell 78 (6), 1089-1099 (1994)
PUBMED 7923358
REFERENCE 2 (bases 1 to 3934)
AUTHORS Katagiri F, Yuan F, Ausubel FM.
TITLE A plant cDNA expression vector carrying a modified version of the
cauliflower mosaic virus 35S promoter that has a reduced activity in
bacteria
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 3934)
AUTHORS Katagiri F, Ausubel FM.
TITLE Direct Submission
JOURNAL Submitted (21-JAN-1998) Biological Sciences, University of Maryland
Baltimore County, 1000 Hilltop Circle, Baltimore, MD 21250, USA
REFERENCE 4 (bases 1 to 3934)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3934
/organism="Expression vector pKEx4tr"
/mol_type="genomic DNA"
/label=derived from pUC18 vector
/note="derived from pUC18 vector"
/db_xref="taxon:72436"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 417..1305
/regulatory_class="promoter"
/note="modified cauliflower mosaic virus 35S promoter"
terminator 1199..1245
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
regulatory 1312..1334
/regulatory_class="promoter"
/note="T7 promoter"
promoter 1312..1330
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 1335..1389
/note="multiple cloning site; contains unique restriction
sites for PmeI, SalI, EcoRI, BamHI, XhoI, NotI, SacII, and
SacI"
regulatory complement(1401..1420)
/regulatory_class="promoter"
/note="T3 promoter"
promoter complement(1402..1420)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
regulatory 1437..1690
/regulatory_class="terminator"
/note="3 end of nopalin synthase gene"
terminator 1437..1689
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
misc_feature 1704..404
/label=similar to pUC18 vector
/note="similar to pUC18 vector"
primer_bind complement(1713..1729)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1737..1753
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1761..1791)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1806..1827
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2115..2703)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2874..3734)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(3735..3839)
/gene="bla"
/label=AmpR promoter