LOCUS Exported 4663 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pJLS149, complete sequence.
ACCESSION MG752896
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4663)
AUTHORS Stoudenmire JL, Essock-Burns T, Weathers EN, Solaimanpour S, Mrazek
J, Stabb EV.
TITLE An iterative synthetic approach to engineer a high-performing
PhoB-specific reporter
JOURNAL Appl. Environ. Microbiol. (2018) In press
PUBMED 29752265
REFERENCE 2 (bases 1 to 4663)
AUTHORS Stoudenmire JL, Stabb EV.
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2018) Microbiology, University of Georgia, 120
Cedar Street, Athens, GA 30605, USA
REFERENCE 3 (bases 1 to 4663)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4663
/organism="Cloning vector pJLS149"
/mol_type="other DNA"
/db_xref="taxon:2212377"
CDS 62..535
/codon_start=1
/product="trimethoprim resistance protein"
/label=trimethoprim resistance protein
/note="Drf1"
/protein_id="AWO14315.1"
/translation="MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVGR
KTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEIYK
SLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG"
CDS complement(578..1288)
/codon_start=1
/product="red florescent protein MCherry"
/label=red florescent protein MCherry
/protein_id="AWO14317.1"
/translation="MVSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEG
TQTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNF
EDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALK
GEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERA
EGRHSTGGMDELYK"
primer_bind 1390..1406
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS complement(1485..2567)
/codon_start=1
/product="Lac repressor protein"
/label=Lac repressor protein
/note="LaqIQ"
/protein_id="AWO14316.1"
/translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
promoter complement(2568..2645)
/gene="lacI (mutant)"
/label=lacIq promoter
/note="In the lacIq allele, a single base change in the
promoter boosts expression of the lacI gene about 10-fold."
protein_bind 2747..2763
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
protein_bind 2780..2796
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind complement(2860..2876)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2951..2969)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
rep_origin 2990..3378
/label=R6K gamma ori
/note="gamma replication origin from E. coli plasmid R6K;
requires the R6K initiator protein pi for replication"
oriT 4362..4471
/note="incP origin of transfer"
LOCUS Exported 4663 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pJLS149, complete sequence.
ACCESSION MG752896
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4663)
AUTHORS Stoudenmire JL, Essock-Burns T, Weathers EN, Solaimanpour S, Mrazek
J, Stabb EV.
TITLE An iterative synthetic approach to engineer a high-performing
PhoB-specific reporter
JOURNAL Appl. Environ. Microbiol. (2018) In press
PUBMED 29752265
REFERENCE 2 (bases 1 to 4663)
AUTHORS Stoudenmire JL, Stabb EV.
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2018) Microbiology, University of Georgia, 120
Cedar Street, Athens, GA 30605, USA
REFERENCE 3 (bases 1 to 4663)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4663
/organism="Cloning vector pJLS149"
/mol_type="other DNA"
/db_xref="taxon:2212377"
CDS 62..535
/codon_start=1
/product="trimethoprim resistance protein"
/label=trimethoprim resistance protein
/note="Drf1"
/protein_id="AWO14315.1"
/translation="MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVGR
KTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEIYK
SLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG"
CDS complement(578..1288)
/codon_start=1
/product="red florescent protein MCherry"
/label=red florescent protein MCherry
/protein_id="AWO14317.1"
/translation="MVSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEG
TQTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNF
EDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALK
GEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERA
EGRHSTGGMDELYK"
primer_bind 1390..1406
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS complement(1485..2567)
/codon_start=1
/product="Lac repressor protein"
/label=Lac repressor protein
/note="LaqIQ"
/protein_id="AWO14316.1"
/translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
promoter complement(2568..2645)
/gene="lacI (mutant)"
/label=lacIq promoter
/note="In the lacIq allele, a single base change in the
promoter boosts expression of the lacI gene about 10-fold."
protein_bind 2747..2763
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
protein_bind 2780..2796
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind complement(2860..2876)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2951..2969)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
rep_origin 2990..3378
/label=R6K gamma ori
/note="gamma replication origin from E. coli plasmid R6K;
requires the R6K initiator protein pi for replication"
oriT 4362..4471
/note="incP origin of transfer"