Goodson J, Klupt S, Zhang C, Straight P, Winkler W.
pJG102 载体载体图谱
pJG102 载体载体序列
LOCUS Exported 5477 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pJG102, complete sequence.
ACCESSION KX499654
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5477)
AUTHORS Goodson J, Klupt S, Zhang C, Straight P, Winkler W.
TITLE A Broadly Conserved Antiterminator Protein Controls a Regulon of
Bacillus amyloliquefaciens Antibiotic Gene Clusters
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5477)
AUTHORS Goodson JR, Klupt SL.
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2016) Cell Biology and Molecular Genetics,
University of Maryland, 3112 Bioscience Research Building, College
Park, MD 20742, USA
REFERENCE 3 (bases 1 to 5477)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5477
/organism="Cloning vector pJG102"
/mol_type="other DNA"
/country="USA"
/note="for ectopic integration into the Bacillus
amyloliquefaciens chromosome."
/db_xref="taxon:1930841"
primer_bind 379..395
/note="M13 fwd; common sequencing primer, one of multiple
similar variants"
misc_feature 396..1005
/note="loaP region homology; loaP region homology
containing dfnA and its leader region"
regulatory complement(1006..1164)
/regulatory_class="promoter"
/note="Pconst"
CDS 1615..2349
/codon_start=1
/gene="erm"
/product="hypothetical protein"
/label=erm
/note="ErmR"
/protein_id="APU90125.1"
/translation="MNEKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFT
LELVKRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYKIYGNIPY
NISTDIIRKIVFDSIANEIYLIVEYGFAKRLLNTKRSLALLLMAEVDISILSMVPREYF
HPKPKVNSSLIRLSRKKSRISHKDKQKYNYFVMKWVNKEYKKIFTKNQFNNSLKHAGID
DLNNISFEQFLSLFNSYKLFNK"
gene 1615..2349
/gene="erm"
/label=erm
misc_feature 2443..3212
/note="LoaP Region Homology; homology region downstream of
loaP"
gene 2443..2473
/pseudo
/gene="loaP"
/label=loaP
/note="3; fragment of loaP left after marker replacement"
primer_bind complement(3256..3272)
/note="M13 rev; common sequencing primer, one of multiple
similar variants"
protein_bind 3280..3296
/label=lac repressor encoded by lacI binding site
/bound_moiety="lac repressor encoded by lacI"
/note="lac operator; The lac repressor binds to the lac
operator to inhibit transcription in E. coli. This
inhibition can be relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
regulatory complement(3304..3334)
/regulatory_class="promoter"
/note="lac promoter; promoter for the E. coli lac operon"
promoter complement(3304..3334)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3349..3370
/label=E. coli catabolite activator protein binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding site; CAP binding activates
transcription in the presence of cAMP."
rep_origin complement(3658..4246)
/direction=LEFT
/note="ori; high-copy-number ColE1/pMB1/pBR322/pUC origin
of replication"
CDS complement(4417..5277)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampR; gene=bla - note=ampicillin resistance -
codon_start=1 - transl_table=11 - product=beta-lactamase -
protein_id=AAB40303.1 - db_xref=GI:1185570 -
translation=MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGY -
IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAG"
/protein_id="APU90126.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(4417..5277)
/gene="bla"
/label=bla
regulatory complement(5278..5382)
/regulatory_class="promoter"
/gene="bla"
/note="AmpR promoter"
promoter complement(5278..5382)
/gene="bla"
/label=AmpR promoter
Goodson J, Klupt S, Zhang C, Straight P, Winkler W.
pJG102 载体载体图谱
pJG102 载体载体序列
LOCUS Exported 5477 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pJG102, complete sequence.
ACCESSION KX499654
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5477)
AUTHORS Goodson J, Klupt S, Zhang C, Straight P, Winkler W.
TITLE A Broadly Conserved Antiterminator Protein Controls a Regulon of
Bacillus amyloliquefaciens Antibiotic Gene Clusters
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5477)
AUTHORS Goodson JR, Klupt SL.
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2016) Cell Biology and Molecular Genetics,
University of Maryland, 3112 Bioscience Research Building, College
Park, MD 20742, USA
REFERENCE 3 (bases 1 to 5477)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5477
/organism="Cloning vector pJG102"
/mol_type="other DNA"
/country="USA"
/note="for ectopic integration into the Bacillus
amyloliquefaciens chromosome."
/db_xref="taxon:1930841"
primer_bind 379..395
/note="M13 fwd; common sequencing primer, one of multiple
similar variants"
misc_feature 396..1005
/note="loaP region homology; loaP region homology
containing dfnA and its leader region"
regulatory complement(1006..1164)
/regulatory_class="promoter"
/note="Pconst"
CDS 1615..2349
/codon_start=1
/gene="erm"
/product="hypothetical protein"
/label=erm
/note="ErmR"
/protein_id="APU90125.1"
/translation="MNEKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFT
LELVKRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYKIYGNIPY
NISTDIIRKIVFDSIANEIYLIVEYGFAKRLLNTKRSLALLLMAEVDISILSMVPREYF
HPKPKVNSSLIRLSRKKSRISHKDKQKYNYFVMKWVNKEYKKIFTKNQFNNSLKHAGID
DLNNISFEQFLSLFNSYKLFNK"
gene 1615..2349
/gene="erm"
/label=erm
misc_feature 2443..3212
/note="LoaP Region Homology; homology region downstream of
loaP"
gene 2443..2473
/pseudo
/gene="loaP"
/label=loaP
/note="3; fragment of loaP left after marker replacement"
primer_bind complement(3256..3272)
/note="M13 rev; common sequencing primer, one of multiple
similar variants"
protein_bind 3280..3296
/label=lac repressor encoded by lacI binding site
/bound_moiety="lac repressor encoded by lacI"
/note="lac operator; The lac repressor binds to the lac
operator to inhibit transcription in E. coli. This
inhibition can be relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
regulatory complement(3304..3334)
/regulatory_class="promoter"
/note="lac promoter; promoter for the E. coli lac operon"
promoter complement(3304..3334)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3349..3370
/label=E. coli catabolite activator protein binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding site; CAP binding activates
transcription in the presence of cAMP."
rep_origin complement(3658..4246)
/direction=LEFT
/note="ori; high-copy-number ColE1/pMB1/pBR322/pUC origin
of replication"
CDS complement(4417..5277)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampR; gene=bla - note=ampicillin resistance -
codon_start=1 - transl_table=11 - product=beta-lactamase -
protein_id=AAB40303.1 - db_xref=GI:1185570 -
translation=MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGY -
IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAG"
/protein_id="APU90126.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(4417..5277)
/gene="bla"
/label=bla
regulatory complement(5278..5382)
/regulatory_class="promoter"
/gene="bla"
/note="AmpR promoter"
promoter complement(5278..5382)
/gene="bla"
/label=AmpR promoter