| 载体基本信息 |
| 载体名称 |
pJFR1 |
载体长度 |
11252 bp |
| 载体类型 |
Cloning vector |
载体来源 |
Fernandez-Rodriguez J, Moser F, Voigt CA. |
pJFR1 载体载体图谱
pJFR1 载体载体序列
LOCUS Exported 11252 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pJFR1, complete sequence.
ACCESSION KX011464
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 11252)
AUTHORS Fernandez-Rodriguez J, Moser F, Voigt CA.
TITLE Multichromatic Bacterial Photography
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 11252)
AUTHORS Fernandez-Rodriguez J, Moser F, Voigt CA.
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2016) Biological Engineering, MIT, 500 Tech
Square, Rm 140, Cambridge, MA 02139, USA
REFERENCE 3 (bases 1 to 11252)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..11252
/organism="Cloning vector pJFR1"
/mol_type="other DNA"
/db_xref="taxon:1978232"
misc_feature 1..61
/label=Terminator L3S2P21
/note="Terminator L3S2P21"
misc_feature 87..107
/label=BioBrick suffix
/note="universal suffix for all parts"
misc_feature complement(108..236)
/label=similar to SynZip 17
/note="similar to SynZip 17"
misc_feature complement(237..257)
/label=GGSGGGS linker
/note="GGSGGGS linker"
misc_feature complement(258..2057)
/label=similar to T7 RNA Polymerase core
/note="similar to T7 RNA Polymerase core"
regulatory 2088..2122
/regulatory_class="promoter"
/note="Promoter J23105"
misc_feature 2172..2228
/label=Terminator ECK120033737
/note="Terminator ECK120033737"
CDS complement(2241..2945)
/codon_start=1
/product="ccaR"
/label=ccaR
/protein_id="ARG47669.1"
/translation="MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEY
DLVILDVMLPELDGITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVD
LGELFARVRALLRRGCATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLR
NGRRVLSRSMIIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLA
NLTEKSLCQGKN"
CDS complement(2986..5247)
/codon_start=1
/product="ccaS"
/label=ccaS
/protein_id="ARG47670.1"
/translation="MGKFLIPIEFVFLAIAMTCYLWHRQNQERRRIEISIKQQTQRERF
INQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLIYRIWQDGTGSAITESVNANYPSI
LGRTFSDEVFPVEYHQAYTKGKVRAINDIDQDDIEICLADFVKQFGVKSKLVVPILQHN
RASSLDNESEFPYLWGLLITHQCAFTRPWQPWEVELMKQLANQVAIAIQQSELYEQLQQ
LNKDLENRVEKRTQQLAATNQSLRMEISERQKTEAALRHTNHTLQSLIAASPRGIFTLN
LADQIQIWNPTAERIFGWTETEIIAHPELLTSNILLEDYQQFKQKVLSGMVSPSLELKC
QKKDGSWIEIVLSAAPLLDSEENIAGLVAVVADITEQKRQAEQIRLLQSVVVNTNDAVV
ITEAEPIDDPGPRILYVNEAFTKITGYTAEEMLGKTPRVLQGPKTSRTELDRVRQAISQ
WQSVTVEVINYRKDGSEFWVEFSLVPVANKTGFYTHWIAVQRDVTERRRTEEVRLALER
EKELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKN
MVQLLDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTK
ALVDERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSEQIIFEVTDQGIGISPEDQKQI
FEPFHRGKNVRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICLKRYNHLPRA
"
regulatory 5283..5317
/regulatory_class="promoter"
/note="Promoter J23108"
promoter complement(5283..5316)
/label=J23119 promoter
/note="bacterial promoter (Registry of Standard Biological
Parts BBa_J23119)"
regulatory 5363..5397
/regulatory_class="promoter"
/note="Promoter J23106"
CDS 5428..7662
/codon_start=1
/product="cph8 (G722V)"
/label=cph8
/protein_id="ARG47671.1"
/translation="MATTVQLSDQSLRQLETLAIHTAHLIQPHGLVVVLQEPDLTISQI
SANCTGILGRSPEDLLGRTLGEVFDSFQIDPIQSRLTAGQISSLNPSKLWARVMGDDFV
IFDGVFHRNSDGLLVCELEPAYTSDNLPFLGFYHMANAALNRLRQQANLRDFYDVIVEE
VRRMTGFDRVMLYRFDENNHGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIR
VIPDVYGVAVPLTPAVNPSTNRAVDLTESILRSAYHCHLTYLKNMGVGASLTISLIKDG
HLWGLIACHHQTPKVIPFELRKACEFFGRVVFSNISAQEDTETFDYRVQLAEHEAVLLD
KMTTAADFVEGLTNHPDRLLGLTGSQGAAICFGEKLILVGETPDEKAVQYLLQWLENRE
VQDVFFTSSLSQIYPDAVNFKSVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAY
EATQEDGKIELHPRQSFDLWKEIVRLQSLPWQSVEIQSALALKKAIVNLILRQAEELHM
AAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEECNAIIE
QFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHPLSIKRAV
ANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTIS
GTGLGLAIVQRIVDNHNGMLELGTSERVGLSIRAWLPVPVTRAQGTTKEG"
misc_feature 7669..7725
/label=Terminator L3S2P11
/note="Terminator L3S2P11"
promoter 7751..7828
/gene="lacI (mutant)"
/label=lacIq promoter
/note="In the lacIq allele, a single base change in the
promoter boosts expression of the lacI gene about 10-fold."
regulatory 7766..7802
/regulatory_class="promoter"
/note="Promoter LacIq35"
misc_feature 7829..8954
/label=similar to YF1
/note="similar to YF1"
CDS 8968..9585
/codon_start=1
/product="fixJ"
/label=fixJ
/protein_id="ARG47672.1"
/translation="MTTKGHIYVIDDDAAMRDSLNFLLDSAGFGVTLFDDAQAFLDALP
GLSFGCVVSDVRMPGLDGIELLKRMKAQQSPFPILIMTGHGDVPLAVEAMKLGAVDFLE
KPFEDDRLTAMIESAIRQAEPAAKSEAVAQDIAARVASLSPRERQVMEGLIAGLSNKLI
AREYDISPRTIEVYRANVMTKMQANSLSELVRLAMRAGMLND"
misc_feature 9595..9651
/label=Terminator L3S2P55
/note="Terminator L3S2P55"
rep_origin 9658..10340
/label=colE1 origin
/note="colE1 origin"
rep_origin complement(9676..10264)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 10345..10451
/label=Terminator T0
/note="Terminator T0"
terminator 10352..10446
/label=lambda t0 terminator
/note="transcription terminator from phage lambda"
CDS complement(10467..11126)
/codon_start=1
/product="camR"
/label=camR
/protein_id="ARG47673.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"