LOCUS Exported 5128 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pHyVec4, complete sequence.
ACCESSION DQ385853
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5128)
AUTHORS Steele RE, Chan TA.
TITLE Vectors for expression of cloned genes in Hydra
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5128)
AUTHORS Steele RE, Chan TA.
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2006) Department of Biological Chemistry,
University of California, Irvine, 240D Medical Sciences I, Irvine,
CA 92697-1700, USA
REFERENCE 3 (bases 1 to 5128)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5128
/organism="Cloning vector pHyVec4"
/mol_type="other DNA"
/db_xref="taxon:372020"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
regulatory 654..1557
/regulatory_class="promoter"
/note="Hydra vulgaris actin gene promoter"
CDS 1714..2430
/codon_start=1
/product="green fluorescent protein"
/label=green fluorescent protein
/protein_id="ABD39512.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFCYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
misc_feature 2431..2926
/label=Hydra vulgaris actin gene 3 flanking sequence
/note="Hydra vulgaris actin gene 3 flanking sequence"
regulatory 2562..2567
/regulatory_class="polyA_signal_sequence"
misc_feature 2927..653
/label=derived from pBluescript II SK+
/note="derived from pBluescript II SK+"
promoter complement(2940..2958)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2979..2995)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 3003..3019
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3027..3057)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3072..3093
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3381..3969)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4140..5000)
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/note="ampicillin resistance protein"
/protein_id="ABD39513.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(5001..5105)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 5128 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pHyVec4, complete sequence.
ACCESSION DQ385853
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5128)
AUTHORS Steele RE, Chan TA.
TITLE Vectors for expression of cloned genes in Hydra
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5128)
AUTHORS Steele RE, Chan TA.
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2006) Department of Biological Chemistry,
University of California, Irvine, 240D Medical Sciences I, Irvine,
CA 92697-1700, USA
REFERENCE 3 (bases 1 to 5128)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5128
/organism="Cloning vector pHyVec4"
/mol_type="other DNA"
/db_xref="taxon:372020"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
regulatory 654..1557
/regulatory_class="promoter"
/note="Hydra vulgaris actin gene promoter"
CDS 1714..2430
/codon_start=1
/product="green fluorescent protein"
/label=green fluorescent protein
/protein_id="ABD39512.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFCYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
misc_feature 2431..2926
/label=Hydra vulgaris actin gene 3 flanking sequence
/note="Hydra vulgaris actin gene 3 flanking sequence"
regulatory 2562..2567
/regulatory_class="polyA_signal_sequence"
misc_feature 2927..653
/label=derived from pBluescript II SK+
/note="derived from pBluescript II SK+"
promoter complement(2940..2958)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2979..2995)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 3003..3019
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3027..3057)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3072..3093
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3381..3969)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4140..5000)
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/note="ampicillin resistance protein"
/protein_id="ABD39513.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(5001..5105)
/gene="bla"
/label=AmpR promoter