LOCUS Exported 5238 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pHQRep(6X), complete sequence.
ACCESSION KJ184341
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5238)
AUTHORS Ma JZ, Ma YL, Huang F.
TITLE An efficient plant transient expression vector system
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5238)
AUTHORS Ma JZ, Ma YL, Huang F.
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2014) School of Life Science, LanZhou University
of Technology, Qili River Street, Lanzhou, Gansu 730050, China
REFERENCE 3 (bases 1 to 5238)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5238
/organism="Expression vector pHQRep(6X)"
/mol_type="other DNA"
/db_xref="taxon:1483523"
rep_origin complement(183..771)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(942..1802)
/codon_start=1
/product="ampicillin resistance protein"
/label=ampicillin resistance protein
/protein_id="AHV90405.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(1803..1907)
/gene="bla"
/label=AmpR promoter
primer_bind 2381..2397
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 2404..2531
/label=contains six repeated upstream GAL4 binding sites
/note="contains six repeated upstream GAL4 binding sites"
regulatory 2544..2656
/regulatory_class="promoter"
/note="partial 35S promoter"
promoter 2599..2645
/label=minimal CaMV 35S promoter
/note="minimal 35S promoter from cauliflower mosaic virus"
CDS join(2664..2678,2869..4686)
/codon_start=1
/product="beta-glucuronidase"
/label=GUS
/note="This version of the gusA gene has a 5 extension
with a catalase intron to ensure expression in plants but
not bacteria."
/translation="MVDLRNRRLVRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWES
ALQESRAIAVPGSFNDQFADADIRNYAGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGK
VWVNNQEVMEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGK
KKQSYFHDFFNYAGIHRSVMLYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSV
ELRDADQQVVATGQGTSGTLQVVNPHLWQPGEGYLYELEVTAKSQTESDIYPLRVGIRS
VAVKGQQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYP
YAEEMLDWADEHGIVVIDETAAVGFQLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQA
IKELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCD
AHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVDT
LAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGNKK
GIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQGGKQ"
intron 2679..2868
/label=cat1 intron
/note="castor bean catalase intron, modified"
misc_feature 2869..4716
/label=partial GUS coding region
/note="partial GUS coding region"
CDS 4693..4710
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
terminator 4745..4997
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
regulatory 4748..5000
/regulatory_class="terminator"
/note="NOS terminator"
primer_bind complement(5019..5035)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 5043..5059
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(5067..5097)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5112..5133
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
LOCUS Exported 5238 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pHQRep(6X), complete sequence.
ACCESSION KJ184341
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5238)
AUTHORS Ma JZ, Ma YL, Huang F.
TITLE An efficient plant transient expression vector system
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5238)
AUTHORS Ma JZ, Ma YL, Huang F.
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2014) School of Life Science, LanZhou University
of Technology, Qili River Street, Lanzhou, Gansu 730050, China
REFERENCE 3 (bases 1 to 5238)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5238
/organism="Expression vector pHQRep(6X)"
/mol_type="other DNA"
/db_xref="taxon:1483523"
rep_origin complement(183..771)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(942..1802)
/codon_start=1
/product="ampicillin resistance protein"
/label=ampicillin resistance protein
/protein_id="AHV90405.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(1803..1907)
/gene="bla"
/label=AmpR promoter
primer_bind 2381..2397
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 2404..2531
/label=contains six repeated upstream GAL4 binding sites
/note="contains six repeated upstream GAL4 binding sites"
regulatory 2544..2656
/regulatory_class="promoter"
/note="partial 35S promoter"
promoter 2599..2645
/label=minimal CaMV 35S promoter
/note="minimal 35S promoter from cauliflower mosaic virus"
CDS join(2664..2678,2869..4686)
/codon_start=1
/product="beta-glucuronidase"
/label=GUS
/note="This version of the gusA gene has a 5 extension
with a catalase intron to ensure expression in plants but
not bacteria."
/translation="MVDLRNRRLVRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWES
ALQESRAIAVPGSFNDQFADADIRNYAGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGK
VWVNNQEVMEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGK
KKQSYFHDFFNYAGIHRSVMLYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSV
ELRDADQQVVATGQGTSGTLQVVNPHLWQPGEGYLYELEVTAKSQTESDIYPLRVGIRS
VAVKGQQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYP
YAEEMLDWADEHGIVVIDETAAVGFQLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQA
IKELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCD
AHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVDT
LAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGNKK
GIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQGGKQ"
intron 2679..2868
/label=cat1 intron
/note="castor bean catalase intron, modified"
misc_feature 2869..4716
/label=partial GUS coding region
/note="partial GUS coding region"
CDS 4693..4710
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
terminator 4745..4997
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
regulatory 4748..5000
/regulatory_class="terminator"
/note="NOS terminator"
primer_bind complement(5019..5035)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 5043..5059
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(5067..5097)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5112..5133
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."