Boy AL, Zhai Z, Habring-Mueller A, Kaspar P, Lohmann I.
pHPdestVenus 载体载体图谱
pHPdestVenus 载体载体序列
LOCUS Exported 12196 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning and transformation vector pHPdestVenus, complete sequence.
ACCESSION GU142865
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 12196)
AUTHORS Boy AL, Zhai Z, Habring-Mueller A, Kaspar P, Lohmann I.
TITLE Vectors for efficient and high-throughput construction of
fluorescent Drosophila reporters using the PhiC31 site-specific
integration system
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 12196)
AUTHORS Lohmann I, Boy AL, Habring-Mueller A.
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2009) CellNetworks - Cluster of Excellence and
BIOQUANT Center, University of Heidelberg, Im Neuenheimer Feld 267,
Heidelberg 69120, Germany
REFERENCE 3 (bases 1 to 12196)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..12196
/organism="Cloning and transformation vector pHPdestVenus"
/mol_type="other DNA"
/db_xref="taxon:693962"
protein_bind 63..187
/gene="mutant version of attR"
/label=attR1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_feature 188..1642
/label=Gateway cassette
/note="Gateway cassette"
promoter 212..242
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
CDS 296..955
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=CmR
/note="confers resistance to chloramphenicol"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
CDS 1297..1602
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/label=ccdB
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
protein_bind complement(1643..1767)
/gene="mutant version of attR"
/label=attR2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
regulatory 1779..1911
/regulatory_class="promoter"
/note="Hsp70 promotor"
regulatory 1974..1983
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS 1980..2729
/codon_start=1
/product="Venus+Strep tag"
/label=Venus+Strep tag
/protein_id="ACZ51347.1"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KLICTTGKLPVPWPTLVTTLGYGLQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIK
ANFKIRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLL
EFVTAAGITLGMDELYKGAWSHPQFEK"
CDS 1980..2696
/codon_start=1
/product="Venus YFP with monomerizing A206K mutation (Nagai
et al., 2002)"
/label=mVenus
/note="mammalian codon-optimized"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KLICTTGKLPVPWPTLVTTLGYGLQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIK
ANFKIRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLL
EFVTAAGITLGMDELYK"
CDS 2703..2726
/codon_start=1
/product="peptide that binds Strep-Tactin(R), an engineered
form of streptavidin"
/label=Strep-Tag II
/translation="WSHPQFEK"
polyA_signal 2856..2977
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
misc_feature 3007..3291
/label=attB site for phiC31 integrase
/note="attB site for phiC31 integrase"
protein_bind 3201..3270
/label=attB
/bound_moiety="phage phi-C31 integrase"
/note="attB site for the phi-C31 integrase (Groth et al.,
2000)"
misc_feature 3297..3683
/label=gypsy insulator
/note="gypsy insulator"
protein_bind 3298..3683
/label=gypsy insulator
/bound_moiety="Su(Hw), CP190, and Mod(mdg4)67.2"
/note="chromatin insulator from Drosophila"
gene 4163..7043
/gene="mini-white"
/label=mini-white
misc_feature 7821..8406
/label=P element 5 end
misc_feature 7822..8406
/label=P element 5 prime end
/note="P element 5 prime end"
misc_feature 8407..8634
/label=white linker sequence
/note="white linker sequence"
misc_feature 8635..10663
/label=pUC8 plasmid DNA
/note="pUC8 plasmid DNA"
rep_origin complement(8641..9229)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(9400..10260)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(10261..10365)
/gene="bla"
/label=AmpR promoter
misc_feature 10664..11166
/label=white linker sequence
/note="white linker sequence"
misc_feature 11167..11405
/label=P element 3 prime end
/note="P element 3 prime end"
misc_feature 11167..11399
/label=P element 3 end
/note="P element 3 end"
misc_feature 11778..12193
/label=gypsy insulator
/note="gypsy insulator"
protein_bind 11798..12183
/label=gypsy insulator
/bound_moiety="Su(Hw), CP190, and Mod(mdg4)67.2"
/note="chromatin insulator from Drosophila"
Boy AL, Zhai Z, Habring-Mueller A, Kaspar P, Lohmann I.
pHPdestVenus 载体载体图谱
pHPdestVenus 载体载体序列
LOCUS Exported 12196 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning and transformation vector pHPdestVenus, complete sequence.
ACCESSION GU142865
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 12196)
AUTHORS Boy AL, Zhai Z, Habring-Mueller A, Kaspar P, Lohmann I.
TITLE Vectors for efficient and high-throughput construction of
fluorescent Drosophila reporters using the PhiC31 site-specific
integration system
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 12196)
AUTHORS Lohmann I, Boy AL, Habring-Mueller A.
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2009) CellNetworks - Cluster of Excellence and
BIOQUANT Center, University of Heidelberg, Im Neuenheimer Feld 267,
Heidelberg 69120, Germany
REFERENCE 3 (bases 1 to 12196)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..12196
/organism="Cloning and transformation vector pHPdestVenus"
/mol_type="other DNA"
/db_xref="taxon:693962"
protein_bind 63..187
/gene="mutant version of attR"
/label=attR1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_feature 188..1642
/label=Gateway cassette
/note="Gateway cassette"
promoter 212..242
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
CDS 296..955
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=CmR
/note="confers resistance to chloramphenicol"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
CDS 1297..1602
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/label=ccdB
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
protein_bind complement(1643..1767)
/gene="mutant version of attR"
/label=attR2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
regulatory 1779..1911
/regulatory_class="promoter"
/note="Hsp70 promotor"
regulatory 1974..1983
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS 1980..2729
/codon_start=1
/product="Venus+Strep tag"
/label=Venus+Strep tag
/protein_id="ACZ51347.1"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KLICTTGKLPVPWPTLVTTLGYGLQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIK
ANFKIRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLL
EFVTAAGITLGMDELYKGAWSHPQFEK"
CDS 1980..2696
/codon_start=1
/product="Venus YFP with monomerizing A206K mutation (Nagai
et al., 2002)"
/label=mVenus
/note="mammalian codon-optimized"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KLICTTGKLPVPWPTLVTTLGYGLQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIK
ANFKIRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLL
EFVTAAGITLGMDELYK"
CDS 2703..2726
/codon_start=1
/product="peptide that binds Strep-Tactin(R), an engineered
form of streptavidin"
/label=Strep-Tag II
/translation="WSHPQFEK"
polyA_signal 2856..2977
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
misc_feature 3007..3291
/label=attB site for phiC31 integrase
/note="attB site for phiC31 integrase"
protein_bind 3201..3270
/label=attB
/bound_moiety="phage phi-C31 integrase"
/note="attB site for the phi-C31 integrase (Groth et al.,
2000)"
misc_feature 3297..3683
/label=gypsy insulator
/note="gypsy insulator"
protein_bind 3298..3683
/label=gypsy insulator
/bound_moiety="Su(Hw), CP190, and Mod(mdg4)67.2"
/note="chromatin insulator from Drosophila"
gene 4163..7043
/gene="mini-white"
/label=mini-white
misc_feature 7821..8406
/label=P element 5 end
misc_feature 7822..8406
/label=P element 5 prime end
/note="P element 5 prime end"
misc_feature 8407..8634
/label=white linker sequence
/note="white linker sequence"
misc_feature 8635..10663
/label=pUC8 plasmid DNA
/note="pUC8 plasmid DNA"
rep_origin complement(8641..9229)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(9400..10260)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(10261..10365)
/gene="bla"
/label=AmpR promoter
misc_feature 10664..11166
/label=white linker sequence
/note="white linker sequence"
misc_feature 11167..11405
/label=P element 3 prime end
/note="P element 3 prime end"
misc_feature 11167..11399
/label=P element 3 end
/note="P element 3 end"
misc_feature 11778..12193
/label=gypsy insulator
/note="gypsy insulator"
protein_bind 11798..12183
/label=gypsy insulator
/bound_moiety="Su(Hw), CP190, and Mod(mdg4)67.2"
/note="chromatin insulator from Drosophila"