Zhang N, Wu K, He X, Li S-Q., Zhang Z-H., Shen B, Yang Y-M., Zhang R-F., Huang Q-W., Shen Q-R.
pHapII 载体载体图谱
pHapII 载体载体序列
LOCUS Exported 6838 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION GFP expression vector pHapII, complete sequence.
ACCESSION HM151400
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6838)
AUTHORS Zhang N, Wu K, He X, Li S-Q., Zhang Z-H., Shen B, Yang Y-M., Zhang
R-F., Huang Q-W., Shen Q-R.
TITLE A new bioorganic fertilizer can effectively control banana wilt by
strong colonization with Bacillus subtilis N11
JOURNAL Plant Soil 344 (1-2), 87-97 (2011)
REFERENCE 2 (bases 1 to 6838)
AUTHORS Zhang Z, Tian W, Liu D.
TITLE Development of a GFP vector system in Bacillus under the control of
the constitutive promoter HpaII
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 6838)
AUTHORS Zhang Z, Tian W, Liu D, Zhou T, Wu Y, Liu Y, Xu L.
TITLE Direct Submission
JOURNAL Submitted (26-APR-2010) Jiang Su Provincial Key Lab for Organic
Solid Waste Utilization, Nanjing Agricultural University, Wei Gang
#1, Nan jing, Jiang Su 210095, China
REFERENCE 4 (bases 1 to 6838)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6838
/organism="GFP expression vector pHapII"
/lab_host="Bacillus spp.; Escherichia coli"
/mol_type="other DNA"
/db_xref="taxon:866769"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS 814..1818
/codon_start=1
/gene="repB"
/product="RepB replication protein"
/label=repB
/note="from Enterococcus faecalis plasmid pAM-alpha-1"
/db_xref="GI:22652809"
/protein_id="AAN03827.1"
/translation="MGVSFNIMCPNSSIYSDEKSRVLVDKTKSGKVRPWREKKIANVDY
FELLHILEFKKAERVKDCAEILEYKQNRETGERKLYRVWFCKSRLCPMCNWRRAMKHGI
QSQKVVAEVIKQKPTVRWLFLTLTVKNVYDGEELNKSLSDMAQGFRRMMQYKKINKNLV
GFMRATEVTINNKDNSYNQHMHVLVCVEPTYFKNTENYVNQKQWIQFWKKAMKLDYDPN
VKVQMIRPKNKYKSDIQSAIDETAKYPVKDTDFMTDDEEKNLKRLSDLEEGLHRKRLIS
YGGLLKEIHKKLNLDDTEEGDLIHTDDDEKADEDGFSIIAMWNWERKNYFIKE"
CDS 1111..1818
/codon_start=1
/product="repB"
/label=repB
/protein_id="ADK73493.1"
/translation="MKHGIQSQKVVAEVIKQKPTVRWLFLTLTVKNVYDGEELNKSLSD
MAQGFRRMMQYKKINKNLVGFMRATEVTINNKDNSYNQHMHVLVCVEPTYFKNTENYVN
QKQWIQFWKKAMKLDYDPNVKVQMIRPKNKYKSDIQSAIDETAKYPVKDTDFMTDDEEK
NLKRLSDLEEGLHRKRLISYGGLLKEIHKKLNLDDTEEGDLIHTDDDEKADEDGFSIIA
MWNWERKNYFIKE"
CDS 1987..2748
/codon_start=1
/product="kanamycin nucleotidyltranferase"
/label=kanamycin nucleotidyltranferase
/note="KM"
/protein_id="ADK73494.1"
/translation="MNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTD
GPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILLDYASQVESDWPLTHGQFF
SILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTTFLP
SLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEK
LLESLENFWNGIQEWTERHGYIVDVSKRIPF"
CDS 2965..3216
/codon_start=1
/product="ble"
/label=ble
/protein_id="ADK73495.1"
/translation="MRMLQSIPALPVGDIKKSIGFYWDKVGFTLVHHEDGFAVLMCNEV
RIHLWEASDEGWRLVVMIHRFVQVRSRLLLVLLVAALK"
CDS 3873..4589
/codon_start=1
/product="GFP"
/label=GFP
/protein_id="ADK73496.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
primer_bind complement(4617..4633)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4641..4657
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4665..4695)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4710..4731
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(5019..5607)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5778..6638)
/codon_start=1
/gene="bla"
/product="bla"
/label=bla
/protein_id="ADK73497.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(5778..6638)
/gene="bla"
/label=bla
promoter complement(6639..6743)
/gene="bla"
/label=AmpR promoter
Zhang N, Wu K, He X, Li S-Q., Zhang Z-H., Shen B, Yang Y-M., Zhang R-F., Huang Q-W., Shen Q-R.
pHapII 载体载体图谱
pHapII 载体载体序列
LOCUS Exported 6838 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION GFP expression vector pHapII, complete sequence.
ACCESSION HM151400
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6838)
AUTHORS Zhang N, Wu K, He X, Li S-Q., Zhang Z-H., Shen B, Yang Y-M., Zhang
R-F., Huang Q-W., Shen Q-R.
TITLE A new bioorganic fertilizer can effectively control banana wilt by
strong colonization with Bacillus subtilis N11
JOURNAL Plant Soil 344 (1-2), 87-97 (2011)
REFERENCE 2 (bases 1 to 6838)
AUTHORS Zhang Z, Tian W, Liu D.
TITLE Development of a GFP vector system in Bacillus under the control of
the constitutive promoter HpaII
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 6838)
AUTHORS Zhang Z, Tian W, Liu D, Zhou T, Wu Y, Liu Y, Xu L.
TITLE Direct Submission
JOURNAL Submitted (26-APR-2010) Jiang Su Provincial Key Lab for Organic
Solid Waste Utilization, Nanjing Agricultural University, Wei Gang
#1, Nan jing, Jiang Su 210095, China
REFERENCE 4 (bases 1 to 6838)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6838
/organism="GFP expression vector pHapII"
/lab_host="Bacillus spp.; Escherichia coli"
/mol_type="other DNA"
/db_xref="taxon:866769"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS 814..1818
/codon_start=1
/gene="repB"
/product="RepB replication protein"
/label=repB
/note="from Enterococcus faecalis plasmid pAM-alpha-1"
/db_xref="GI:22652809"
/protein_id="AAN03827.1"
/translation="MGVSFNIMCPNSSIYSDEKSRVLVDKTKSGKVRPWREKKIANVDY
FELLHILEFKKAERVKDCAEILEYKQNRETGERKLYRVWFCKSRLCPMCNWRRAMKHGI
QSQKVVAEVIKQKPTVRWLFLTLTVKNVYDGEELNKSLSDMAQGFRRMMQYKKINKNLV
GFMRATEVTINNKDNSYNQHMHVLVCVEPTYFKNTENYVNQKQWIQFWKKAMKLDYDPN
VKVQMIRPKNKYKSDIQSAIDETAKYPVKDTDFMTDDEEKNLKRLSDLEEGLHRKRLIS
YGGLLKEIHKKLNLDDTEEGDLIHTDDDEKADEDGFSIIAMWNWERKNYFIKE"
CDS 1111..1818
/codon_start=1
/product="repB"
/label=repB
/protein_id="ADK73493.1"
/translation="MKHGIQSQKVVAEVIKQKPTVRWLFLTLTVKNVYDGEELNKSLSD
MAQGFRRMMQYKKINKNLVGFMRATEVTINNKDNSYNQHMHVLVCVEPTYFKNTENYVN
QKQWIQFWKKAMKLDYDPNVKVQMIRPKNKYKSDIQSAIDETAKYPVKDTDFMTDDEEK
NLKRLSDLEEGLHRKRLISYGGLLKEIHKKLNLDDTEEGDLIHTDDDEKADEDGFSIIA
MWNWERKNYFIKE"
CDS 1987..2748
/codon_start=1
/product="kanamycin nucleotidyltranferase"
/label=kanamycin nucleotidyltranferase
/note="KM"
/protein_id="ADK73494.1"
/translation="MNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTD
GPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILLDYASQVESDWPLTHGQFF
SILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTTFLP
SLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEK
LLESLENFWNGIQEWTERHGYIVDVSKRIPF"
CDS 2965..3216
/codon_start=1
/product="ble"
/label=ble
/protein_id="ADK73495.1"
/translation="MRMLQSIPALPVGDIKKSIGFYWDKVGFTLVHHEDGFAVLMCNEV
RIHLWEASDEGWRLVVMIHRFVQVRSRLLLVLLVAALK"
CDS 3873..4589
/codon_start=1
/product="GFP"
/label=GFP
/protein_id="ADK73496.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
primer_bind complement(4617..4633)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4641..4657
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4665..4695)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4710..4731
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(5019..5607)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5778..6638)
/codon_start=1
/gene="bla"
/product="bla"
/label=bla
/protein_id="ADK73497.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(5778..6638)
/gene="bla"
/label=bla
promoter complement(6639..6743)
/gene="bla"
/label=AmpR promoter