LOCUS Exported 5325 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pHA1001-ble-PeEGFP DNA, complete sequence.
ACCESSION LC184596
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5325)
AUTHORS Abe J, Harayama S.
TITLE Expression of ble-PeEGFP fusion protein for bleomycin resistance
protein and codon-optimized green fluorescence protein in
Pseudococcomyxa sp. KJ
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5325)
AUTHORS Abe J, Harayama S.
TITLE Direct Submission
JOURNAL Submitted (12-SEP-2016) Contact:Jun Abe Chuo University, Faculty of
Science and Engineering; 1-13-27 Kasuga, Bunkyo-ku, Tokyo 112-8551,
Japan
REFERENCE 3 (bases 1 to 5325)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5325
/organism="Expression vector pHA1001-ble-PeEGFP"
/mol_type="other DNA"
/db_xref="taxon:1899313"
misc_feature 1..2237
/label=derived from plasmid pBluescript SK(+)
/note="derived from plasmid pBluescript SK(+)"
promoter 24..128
/gene="bla"
/label=AmpR promoter
CDS 129..989
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 1160..1748
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2036..2057
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2072..2102
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2110..2126
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2134..2150
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 2171..2189
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
regulatory 2238..3027
/regulatory_class="promoter"
/note="includes promoter region of Pseudococcomyxa
ellipsoidea nuclear gene RBCS for ribulose bisphosphate
carboxylase/oxygenase small subunit"
CDS 3028..4134
/codon_start=1
/gene="ble-PeEGFP"
/product="bleomycin resistance protein/codon-optimized
green fluorescence protein fusion protein"
/label=ble-PeEGFP
/protein_id="BAV58188.1"
/translation="MAKLTSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDD
VTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGR
EFALRDPAGNCVHFVAEEQDGGSGGRMAKGEELFTGVVPILVELDGDVNGHKFSVSGEG
EGDATYGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGY
VQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVY
IMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKD
PNEKRDHMVLLEFVTAAGITLGMDELYK"
gene 3028..4134
/gene="ble-PeEGFP"
/label=ble-PeEGFP
misc_feature 3028..3399
/gene="ble-PeEGFP"
/note="ble; bleomycin resistance protein"
misc_feature 3400..3417
/gene="ble-PeEGFP"
/label=linker
/note="linker"
misc_feature 3418..4134
/gene="ble-PeEGFP"
/note="PeEGFP; codon-optimized green fluorescence protein"
regulatory 4141..4652
/regulatory_class="terminator"
/note="includes terminator region of Pseudococcomyxa
ellipsoidea RBCS gene"
misc_feature 4653..5325
/label=derived from plasmid pBluescript SK(+)
/note="derived from plasmid pBluescript SK(+)"
promoter complement(4682..4700)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(4710..4726)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin complement(4867..5322)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
LOCUS Exported 5325 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pHA1001-ble-PeEGFP DNA, complete sequence.
ACCESSION LC184596
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5325)
AUTHORS Abe J, Harayama S.
TITLE Expression of ble-PeEGFP fusion protein for bleomycin resistance
protein and codon-optimized green fluorescence protein in
Pseudococcomyxa sp. KJ
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5325)
AUTHORS Abe J, Harayama S.
TITLE Direct Submission
JOURNAL Submitted (12-SEP-2016) Contact:Jun Abe Chuo University, Faculty of
Science and Engineering; 1-13-27 Kasuga, Bunkyo-ku, Tokyo 112-8551,
Japan
REFERENCE 3 (bases 1 to 5325)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5325
/organism="Expression vector pHA1001-ble-PeEGFP"
/mol_type="other DNA"
/db_xref="taxon:1899313"
misc_feature 1..2237
/label=derived from plasmid pBluescript SK(+)
/note="derived from plasmid pBluescript SK(+)"
promoter 24..128
/gene="bla"
/label=AmpR promoter
CDS 129..989
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 1160..1748
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2036..2057
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2072..2102
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2110..2126
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2134..2150
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 2171..2189
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
regulatory 2238..3027
/regulatory_class="promoter"
/note="includes promoter region of Pseudococcomyxa
ellipsoidea nuclear gene RBCS for ribulose bisphosphate
carboxylase/oxygenase small subunit"
CDS 3028..4134
/codon_start=1
/gene="ble-PeEGFP"
/product="bleomycin resistance protein/codon-optimized
green fluorescence protein fusion protein"
/label=ble-PeEGFP
/protein_id="BAV58188.1"
/translation="MAKLTSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDD
VTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGR
EFALRDPAGNCVHFVAEEQDGGSGGRMAKGEELFTGVVPILVELDGDVNGHKFSVSGEG
EGDATYGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGY
VQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVY
IMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKD
PNEKRDHMVLLEFVTAAGITLGMDELYK"
gene 3028..4134
/gene="ble-PeEGFP"
/label=ble-PeEGFP
misc_feature 3028..3399
/gene="ble-PeEGFP"
/note="ble; bleomycin resistance protein"
misc_feature 3400..3417
/gene="ble-PeEGFP"
/label=linker
/note="linker"
misc_feature 3418..4134
/gene="ble-PeEGFP"
/note="PeEGFP; codon-optimized green fluorescence protein"
regulatory 4141..4652
/regulatory_class="terminator"
/note="includes terminator region of Pseudococcomyxa
ellipsoidea RBCS gene"
misc_feature 4653..5325
/label=derived from plasmid pBluescript SK(+)
/note="derived from plasmid pBluescript SK(+)"
promoter complement(4682..4700)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(4710..4726)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin complement(4867..5322)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"