| 载体基本信息 |
| 载体名称 |
pH7WG_ASX |
载体抗性 |
Spectinomycin/Streptomycin |
| 载体长度 |
9369 bp |
载体类型 |
Binary vector |
| 载体来源 |
Lukan T, Machens F, Coll A, Baebler S, Messerschmidt K, Gruden K. |
pH7WG_ASX 载体载体图谱
pH7WG_ASX 载体载体序列
LOCUS Exported 9369 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Binary vector pH7WG_ASX, complete sequence.
ACCESSION MG561372
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9369)
AUTHORS Lukan T, Machens F, Coll A, Baebler S, Messerschmidt K, Gruden K.
TITLE Plant X-tender: An extension of the AssemblX system for the assembly
and expression of multigene constructs in plants
JOURNAL PLoS ONE 13 (1), e0190526 (2018)
PUBMED 29300787
REFERENCE 2 (bases 1 to 9369)
AUTHORS Lukan T, Machens F, Coll A, Baebler S, Messerschmidt K, Gruden K.
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2017) Department of Biotechnology and Systems
Biology, National Institute of Biology, Vecna pot 111, Ljubljana
1000, Slovenia
REFERENCE 3 (bases 1 to 9369)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..9369
/organism="Binary vector pH7WG_ASX"
/mol_type="other DNA"
/db_xref="taxon:2070780"
misc_feature join(1..115,9285..9369)
/label=Right T-DNA border, RB
/note="Right T-DNA border, RB"
misc_feature join(1..8454,9285..9369)
/label=pH7WG backbone
/note="pH7WG backbone"
CDS 1331..1960
/codon_start=1
/product="stability protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
/label=pVS1 StaA
/translation="MKVIAVLNQKGGSGKTTIATHLARALQLAGADVLLVDSDPQGSAR
DWAAVREDQPLTVVGIDRPTIDRDVKAIGRRDFVVIDGAPQAADLAVSAIKAADFVLIP
VQPSPYDIWATADLVELVKQRIEVTDGRLQAAFVVSRAIKGTRIGGEVAEALAGYELPI
LESRITQRVSYPGTAAAGTTVLESEPEGDAAREVQALAAEIKSKLI"
CDS 2394..3461
/codon_start=1
/product="replication protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
/label=pVS1 RepA
/translation="GRKPSGPVQIGAALGDDLVEKLKAAQAAQRQRIEAEARPGESWQA
AADRIRKESRQPPAAGAPSIRKPPKGDEQPDFFVPMLYDVGTRDSRSIMDVAVFRLSKR
DRRAGEVIRYELPDGHVEVSAGPAGMASVWDYDLVLMAVSHLTESMNRYREGKGDKPGR
VFRPHVADVLKFCRRADGGKQKDDLVETCIRLNTTHVAMQRTKKAKNGRLVTVSEGEAL
ISRYKIVKSETGRPEYIEIELADWMYREITEGKNPDVLTVHPDYFLIDPGIGRFLYRLA
RRAAGKAEARWLFKTIYERSGSAGEFKKFCFTVRKLIGSNDLPEYDLKEEAGQAGPILV
MRYRNLIEGEASAGS"
rep_origin 3527..3721
/label=pVS1 oriV
/note="origin of replication for the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
misc_feature 4065..4205
/label=bom
/note="basis of mobility region from pBR322"
rep_origin complement(4391..4979)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature complement(5049..6298)
/label=Spectinomycin resistance cassette
/note="Spectinomycin resistance cassette"
CDS complement(5223..6155)
/codon_start=1
/gene="specR"
/product="SpecR"
/label=specR
/note="Spectinomycin resistance"
/protein_id="AUO29334.1"
/translation="MTCFFGVQSMPRASKQQARYAVGRCLMLWSSNDVTQQGSRPKTKL
NIMGEAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVR
LDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRND
ILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNS
PPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQ
EEDRLASRADQLEEFVHYVKGEITKVVGK"
gene complement(5223..6155)
/gene="specR"
/label=specR
CDS complement(5223..6014)
/codon_start=1
/gene="aadA"
/product="aminoglycoside adenylyltransferase (Murphy,
1985)"
/label=SmR
/note="confers resistance to spectinomycin and
streptomycin"
/translation="MGEAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
misc_feature 6304..6636
/label=left T-DNA border, LB
/note="left T-DNA border, LB"
misc_feature 6542..6566
/label=LB T-DNA repeat
/note="left border repeat from nopaline C58 T-DNA"
misc_feature complement(6640..8414)
/label=Hygromycin resistance cassette
/note="Hygromycin resistance cassette"
terminator 6659..6911
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
CDS complement(7109..8131)
/codon_start=1
/gene="hygR"
/product="HygR"
/label=hygR
/note="Hygromycin resistance"
/protein_id="AUO29335.1"
/translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRG
YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
TVMDDTVSASVAQALDELMLWARTAPKSGTRARGFGSNNVLTDNGRITAVIDWSEAMFG
DSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDGN
FDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAKE
"
gene complement(7109..8131)
/gene="hygR"
/label=hygR
promoter complement(8167..8346)
/label=NOS promoter
/note="nopaline synthase promoter"
misc_feature 8455..8472
/label=I-SceI restriction site
/note="I-SceI restriction site"
misc_feature 8491..8540
/label=homology region A0
/note="homology region A0"
misc_feature 8541..8546
/label=HindIII restriction site
/note="HindIII restriction site"
misc_feature 8547..9209
/label=ccdB cassette
/note="ccdB cassette"
CDS 8876..9181
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/label=ccdB
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VPRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
misc_feature 9210..9215
/label=HindIII restriction site
/note="HindIII restriction site"
misc_feature 9216..9265
/label=homology region B0
/note="homology region B0"
misc_feature complement(9266..9283)
/label=I-SceI restriction site
/note="I-SceI restriction site"
misc_feature 9346..1
/label=RB T-DNA repeat
/note="right border repeat from nopaline C58 T-DNA"