LOCUS Exported 5240 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pGFtef3-hph DNA, complete sequence.
ACCESSION AB909455
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5240)
AUTHORS Sato M, Kurahashi A, Nishibori K, Fujimori F.
TITLE Development of a transformation system for the edible mushroom
Grifola frondosa: demonstrating heterologous gene expression and
RNAi-mediated gene silencing
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5240)
AUTHORS Sato M, Kurahashi A, Nishibori K, Fujimori F.
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2014) Contact:Masayuki Sato Yukiguni Maitake Co.
Ltd., Research and Development; 89 Yokawa, Minamiuonuma, Niigata
949-6695, Japan URL :http://www.maitake.co.jp
REFERENCE 3 (bases 1 to 5240)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5240
/organism="Expression vector pGFtef3-hph"
/mol_type="other DNA"
/db_xref="taxon:1461709"
regulatory 1..727
/regulatory_class="promoter"
/gene="Gf.TEF3"
gene 1..727
/gene="Gf.TEF3"
/label=Gf.TEF3
CDS 728..1753
/codon_start=1
/gene="hph"
/product="hygromycin B phosphotransferase"
/function="hygromycin B resistance"
/label=hph
/note="derived from pLG-hph"
/protein_id="BAQ19365.1"
/translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRG
YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF
GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG
NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK
E"
gene 728..1753
/gene="hph"
/label=hph
regulatory 1754..2550
/regulatory_class="terminator"
/gene="Gf.TEF3"
gene 1754..2550
/gene="Gf.TEF3"
/label=Gf.TEF3
misc_feature 2551..5240
/product="pUC19"
/label=vector sequences derived from pUC19
/note="vector sequences derived from pUC19"
primer_bind complement(2598..2614)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2622..2638
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2646..2676)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2691..2712
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3000..3588)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3759..4619)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4620..4724)
/gene="bla"
/label=AmpR promoter
primer_bind 5198..5214
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 5240 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pGFtef3-hph DNA, complete sequence.
ACCESSION AB909455
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5240)
AUTHORS Sato M, Kurahashi A, Nishibori K, Fujimori F.
TITLE Development of a transformation system for the edible mushroom
Grifola frondosa: demonstrating heterologous gene expression and
RNAi-mediated gene silencing
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5240)
AUTHORS Sato M, Kurahashi A, Nishibori K, Fujimori F.
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2014) Contact:Masayuki Sato Yukiguni Maitake Co.
Ltd., Research and Development; 89 Yokawa, Minamiuonuma, Niigata
949-6695, Japan URL :http://www.maitake.co.jp
REFERENCE 3 (bases 1 to 5240)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5240
/organism="Expression vector pGFtef3-hph"
/mol_type="other DNA"
/db_xref="taxon:1461709"
regulatory 1..727
/regulatory_class="promoter"
/gene="Gf.TEF3"
gene 1..727
/gene="Gf.TEF3"
/label=Gf.TEF3
CDS 728..1753
/codon_start=1
/gene="hph"
/product="hygromycin B phosphotransferase"
/function="hygromycin B resistance"
/label=hph
/note="derived from pLG-hph"
/protein_id="BAQ19365.1"
/translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRG
YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF
GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG
NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK
E"
gene 728..1753
/gene="hph"
/label=hph
regulatory 1754..2550
/regulatory_class="terminator"
/gene="Gf.TEF3"
gene 1754..2550
/gene="Gf.TEF3"
/label=Gf.TEF3
misc_feature 2551..5240
/product="pUC19"
/label=vector sequences derived from pUC19
/note="vector sequences derived from pUC19"
primer_bind complement(2598..2614)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2622..2638
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2646..2676)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2691..2712
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3000..3588)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3759..4619)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4620..4724)
/gene="bla"
/label=AmpR promoter
primer_bind 5198..5214
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"