LOCUS Exported 3419 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pGFPm-T, complete sequence.
ACCESSION EU341596
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3419)
AUTHORS Luo K, Harding SA, Tsai CJ.
TITLE A modified T-vector for simplified assembly of hairpin RNAi
constructs
JOURNAL Biotechnol. Lett. 30 (7), 1271-1274 (2008)
PUBMED 18317701
REFERENCE 2 (bases 1 to 3419)
AUTHORS Luo K-M., Harding SA, Tsai C-J.
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2007) School of Forest Resources and Environmental
Science, Michigan Technological University, 1400 Townsend Drive,
Houghton, MI 49931-1295, USA
REFERENCE 3 (bases 1 to 3419)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3419
/organism="Cloning vector pGFPm-T"
/mol_type="other DNA"
/db_xref="taxon:491879"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 143..173
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 181..197
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 205..221
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 266..283
/label=SP6 promoter
/note="promoter for bacteriophage SP6 RNA polymerase"
misc_feature 310..373
/note="multiple cloning site; includes SwaI, BamHI, XcmI,
XcmI, SpeI and AscI"
promoter complement(411..429)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 450..1166
/codon_start=1
/gene="gfpuv4"
/product="green fluorescent protein variant"
/label=gfpuv4
/note="GFP; BamHI site in gfpuv4 deleted"
/protein_id="ABY58001.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKA
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
gene 450..1166
/gene="gfpuv4"
/label=gfpuv4
promoter 1514..1618
/gene="bla"
/label=AmpR promoter
CDS 1619..2479
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="ABY58002.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 1619..2479
/gene="bla"
/label=bla
rep_origin 2650..3238
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
LOCUS Exported 3419 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pGFPm-T, complete sequence.
ACCESSION EU341596
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3419)
AUTHORS Luo K, Harding SA, Tsai CJ.
TITLE A modified T-vector for simplified assembly of hairpin RNAi
constructs
JOURNAL Biotechnol. Lett. 30 (7), 1271-1274 (2008)
PUBMED 18317701
REFERENCE 2 (bases 1 to 3419)
AUTHORS Luo K-M., Harding SA, Tsai C-J.
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2007) School of Forest Resources and Environmental
Science, Michigan Technological University, 1400 Townsend Drive,
Houghton, MI 49931-1295, USA
REFERENCE 3 (bases 1 to 3419)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3419
/organism="Cloning vector pGFPm-T"
/mol_type="other DNA"
/db_xref="taxon:491879"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 143..173
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 181..197
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 205..221
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 266..283
/label=SP6 promoter
/note="promoter for bacteriophage SP6 RNA polymerase"
misc_feature 310..373
/note="multiple cloning site; includes SwaI, BamHI, XcmI,
XcmI, SpeI and AscI"
promoter complement(411..429)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 450..1166
/codon_start=1
/gene="gfpuv4"
/product="green fluorescent protein variant"
/label=gfpuv4
/note="GFP; BamHI site in gfpuv4 deleted"
/protein_id="ABY58001.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKA
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
gene 450..1166
/gene="gfpuv4"
/label=gfpuv4
promoter 1514..1618
/gene="bla"
/label=AmpR promoter
CDS 1619..2479
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="ABY58002.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 1619..2479
/gene="bla"
/label=bla
rep_origin 2650..3238
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"