LOCUS Exported 6157 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pGFPbglS, complete sequence.
ACCESSION HM204934
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6157)
AUTHORS Bisicchia P, Botella E, Devine KM.
TITLE Suite of novel vectors for ectopic insertion of GFP, CFP and IYFP
transcriptional fusions in single copy at the amyE and bglS loci in
Bacillus subtilis
JOURNAL Plasmid 64 (3), 143-149 (2010)
PUBMED 20600285
REFERENCE 2 (bases 1 to 6157)
AUTHORS Bisicchia P.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2010) Trinity College Dublin, 13 Meades Terrace,
Dublin 2, Ireland
REFERENCE 3 (bases 1 to 6157)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6157
/organism="Cloning vector pGFPbglS"
/lab_host="Bacillus subtilis"
/mol_type="other DNA"
/db_xref="taxon:881625"
rep_origin complement(6..461)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
rep_origin complement(138..444)
/direction=LEFT
/label=f1(+) origin
/note="f1(+) origin"
primer_bind 603..619
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind 677..693
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
misc_recomb 695..1121
/label=bglS front
/note="bglS front"
misc_feature 1134..1169
/label=LIC site
/note="LIC site"
gene 1170..2014
/gene="gfpmut3"
/label=gfpmut3
CDS 1170..1886
/codon_start=1
/gene="gfpmut3"
/product="GFPmut3"
/label=gfpmut3
/protein_id="ADM95140.1"
/translation="MRKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKRHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
terminator 1906..1999
/label=lambda t0 terminator
/note="transcription terminator from phage lambda"
CDS 2571..3365
/codon_start=1
/product="kanamycin resistance determinant"
/label=kanamycin resistance determinant
/protein_id="ADM95141.1"
/translation="MAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKM
TDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED
EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT
PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIA
FCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF"
primer_bind complement(3522..3538)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
misc_recomb 3541..3938
/label=bglS back
/note="bglS back"
promoter complement(3972..3990)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(4011..4027)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4035..4051
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4059..4089)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4104..4125
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4398..5017)
/direction=LEFT
/label=ColE1 origin
/note="ColE1 origin"
rep_origin complement(4413..5001)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5172..6032)
/codon_start=1
/product="ampicillin resistance determinant"
/label=ampicillin resistance determinant
/protein_id="ADM95142.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(6033..6137)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 6157 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pGFPbglS, complete sequence.
ACCESSION HM204934
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6157)
AUTHORS Bisicchia P, Botella E, Devine KM.
TITLE Suite of novel vectors for ectopic insertion of GFP, CFP and IYFP
transcriptional fusions in single copy at the amyE and bglS loci in
Bacillus subtilis
JOURNAL Plasmid 64 (3), 143-149 (2010)
PUBMED 20600285
REFERENCE 2 (bases 1 to 6157)
AUTHORS Bisicchia P.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2010) Trinity College Dublin, 13 Meades Terrace,
Dublin 2, Ireland
REFERENCE 3 (bases 1 to 6157)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6157
/organism="Cloning vector pGFPbglS"
/lab_host="Bacillus subtilis"
/mol_type="other DNA"
/db_xref="taxon:881625"
rep_origin complement(6..461)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
rep_origin complement(138..444)
/direction=LEFT
/label=f1(+) origin
/note="f1(+) origin"
primer_bind 603..619
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind 677..693
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
misc_recomb 695..1121
/label=bglS front
/note="bglS front"
misc_feature 1134..1169
/label=LIC site
/note="LIC site"
gene 1170..2014
/gene="gfpmut3"
/label=gfpmut3
CDS 1170..1886
/codon_start=1
/gene="gfpmut3"
/product="GFPmut3"
/label=gfpmut3
/protein_id="ADM95140.1"
/translation="MRKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKRHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
terminator 1906..1999
/label=lambda t0 terminator
/note="transcription terminator from phage lambda"
CDS 2571..3365
/codon_start=1
/product="kanamycin resistance determinant"
/label=kanamycin resistance determinant
/protein_id="ADM95141.1"
/translation="MAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKM
TDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED
EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT
PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIA
FCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF"
primer_bind complement(3522..3538)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
misc_recomb 3541..3938
/label=bglS back
/note="bglS back"
promoter complement(3972..3990)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(4011..4027)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4035..4051
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4059..4089)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4104..4125
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4398..5017)
/direction=LEFT
/label=ColE1 origin
/note="ColE1 origin"
rep_origin complement(4413..5001)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5172..6032)
/codon_start=1
/product="ampicillin resistance determinant"
/label=ampicillin resistance determinant
/protein_id="ADM95142.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(6033..6137)
/gene="bla"
/label=AmpR promoter