LOCUS Exported 5515 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pGFchs-hph DNA, complete sequence.
ACCESSION AB909456
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5515)
AUTHORS Sato M, Kurahashi A, Nishibori K, Fujimori F.
TITLE Development of a transformation system for the edible mushroom
Grifola frondosa: demonstrating heterologous gene expression and
RNAi-mediated gene silencing
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5515)
AUTHORS Sato M, Kurahashi A, Nishibori K, Fujimori F.
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2014) Contact:Masayuki Sato Yukiguni Maitake Co.
Ltd., Research and Development; 89 Yokawa, Minamiuonuma, Niigata
949-6695, Japan URL :http://www.maitake.co.jp
REFERENCE 3 (bases 1 to 5515)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5515
/organism="Expression vector pGFchs-hph"
/mol_type="other DNA"
/db_xref="taxon:1461710"
regulatory 1..1499
/regulatory_class="promoter"
/gene="Gf.CHS1"
gene 1..1499
/gene="Gf.CHS1"
/label=Gf.CHS1
regulatory 245..254
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS complement(317..328)
/codon_start=1
/product="Factor Xa recognition and cleavage site"
/label=Factor Xa site
/translation="IEGR"
CDS 1500..2525
/codon_start=1
/gene="hph"
/product="hygromycin B phosphotransferase"
/function="hygromycin B resistance"
/label=hph
/note="derived from pLG-hph"
/protein_id="BAQ19366.1"
/translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRG
YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF
GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG
NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK
E"
gene 1500..2525
/gene="hph"
/label=hph
regulatory 2526..2825
/regulatory_class="terminator"
/gene="Gf.CHS1"
gene 2526..2825
/gene="Gf.CHS1"
/label=Gf.CHS1
misc_feature 2826..5515
/product="pUC19"
/label=vector sequences derived from pUC19
/note="vector sequences derived from pUC19"
primer_bind complement(2873..2889)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2897..2913
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2921..2951)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2966..2987
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3275..3863)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4034..4894)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4895..4999)
/gene="bla"
/label=AmpR promoter
primer_bind 5473..5489
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 5515 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pGFchs-hph DNA, complete sequence.
ACCESSION AB909456
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5515)
AUTHORS Sato M, Kurahashi A, Nishibori K, Fujimori F.
TITLE Development of a transformation system for the edible mushroom
Grifola frondosa: demonstrating heterologous gene expression and
RNAi-mediated gene silencing
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5515)
AUTHORS Sato M, Kurahashi A, Nishibori K, Fujimori F.
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2014) Contact:Masayuki Sato Yukiguni Maitake Co.
Ltd., Research and Development; 89 Yokawa, Minamiuonuma, Niigata
949-6695, Japan URL :http://www.maitake.co.jp
REFERENCE 3 (bases 1 to 5515)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5515
/organism="Expression vector pGFchs-hph"
/mol_type="other DNA"
/db_xref="taxon:1461710"
regulatory 1..1499
/regulatory_class="promoter"
/gene="Gf.CHS1"
gene 1..1499
/gene="Gf.CHS1"
/label=Gf.CHS1
regulatory 245..254
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS complement(317..328)
/codon_start=1
/product="Factor Xa recognition and cleavage site"
/label=Factor Xa site
/translation="IEGR"
CDS 1500..2525
/codon_start=1
/gene="hph"
/product="hygromycin B phosphotransferase"
/function="hygromycin B resistance"
/label=hph
/note="derived from pLG-hph"
/protein_id="BAQ19366.1"
/translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRG
YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF
GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG
NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK
E"
gene 1500..2525
/gene="hph"
/label=hph
regulatory 2526..2825
/regulatory_class="terminator"
/gene="Gf.CHS1"
gene 2526..2825
/gene="Gf.CHS1"
/label=Gf.CHS1
misc_feature 2826..5515
/product="pUC19"
/label=vector sequences derived from pUC19
/note="vector sequences derived from pUC19"
primer_bind complement(2873..2889)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2897..2913
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2921..2951)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2966..2987
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3275..3863)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4034..4894)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4895..4999)
/gene="bla"
/label=AmpR promoter
primer_bind 5473..5489
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"