LOCUS Exported 3372 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pGEN01, complete sequence.
ACCESSION JQ280537
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3372)
AUTHORS Kanoria S, Burma PK.
TITLE Cloning vectors for achieving high levels of transgene expression in
plants
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3372)
AUTHORS Kanoria S, Burma PK.
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2011) Genetics, University of Delhi, South Campus,
Benito Juarez Road, New Delhi, New Delhi 110021, India
REFERENCE 3 (bases 1 to 3372)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3372
/organism="Cloning vector pGEN01"
/mol_type="other DNA"
/db_xref="taxon:1165866"
promoter 96..200
/gene="bla"
/label=AmpR promoter
CDS 201..1061
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/note="ampicillin resistant protein"
/protein_id="AFF18870.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 1232..1820
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2108..2129
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2144..2174
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2182..2198
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2206..2222
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 2237..2276
/label=multiple cloning site (upstream of 35S promoter)
/note="multiple cloning site (upstream of 35S promoter)"
promoter 2353..2699
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
regulatory 2353..2697
/regulatory_class="promoter"
/note="35S"
misc_feature 2724..2749
/note="multiple cloning site (between 35S promoter and
polyA)"
regulatory 2752..2954
/regulatory_class="polyA_signal_sequence"
/note="35S"
misc_feature 2952..3192
/label=multiple cloning site (downstream of 35S polyA)
/note="multiple cloning site (downstream of 35S polyA)"
primer_bind complement(2978..2994)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 3372 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pGEN01, complete sequence.
ACCESSION JQ280537
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3372)
AUTHORS Kanoria S, Burma PK.
TITLE Cloning vectors for achieving high levels of transgene expression in
plants
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3372)
AUTHORS Kanoria S, Burma PK.
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2011) Genetics, University of Delhi, South Campus,
Benito Juarez Road, New Delhi, New Delhi 110021, India
REFERENCE 3 (bases 1 to 3372)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3372
/organism="Cloning vector pGEN01"
/mol_type="other DNA"
/db_xref="taxon:1165866"
promoter 96..200
/gene="bla"
/label=AmpR promoter
CDS 201..1061
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/note="ampicillin resistant protein"
/protein_id="AFF18870.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 1232..1820
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2108..2129
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2144..2174
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2182..2198
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2206..2222
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 2237..2276
/label=multiple cloning site (upstream of 35S promoter)
/note="multiple cloning site (upstream of 35S promoter)"
promoter 2353..2699
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
regulatory 2353..2697
/regulatory_class="promoter"
/note="35S"
misc_feature 2724..2749
/note="multiple cloning site (between 35S promoter and
polyA)"
regulatory 2752..2954
/regulatory_class="polyA_signal_sequence"
/note="35S"
misc_feature 2952..3192
/label=multiple cloning site (downstream of 35S polyA)
/note="multiple cloning site (downstream of 35S polyA)"
primer_bind complement(2978..2994)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"