LOCUS Exported 3130 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pGEM-WIZ, complete sequence.
ACCESSION DQ917671
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3130)
AUTHORS Bao S, Cagan R.
TITLE Fast cloning inverted repeats for RNA interference
JOURNAL RNA 12 (11), 2020-2024 (2006)
PUBMED 17005926
REFERENCE 2 (bases 1 to 3130)
AUTHORS Bao S, Cagan R.
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2006) Molecular Biology and Pharmacology,
Washington University, 660 South Euclid Ave, St. Louis, MO 63110,
USA
REFERENCE 3 (bases 1 to 3130)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3130
/organism="Cloning vector pGEM-WIZ"
/mol_type="other DNA"
/note="constructed by removing Drosophila white intron
2-containing XhoI/XbaI fragment of pWIZ and inserting it
into pGEM-S1"
/db_xref="taxon:404006"
misc_feature 10..243
/label=multiple cloning region
/note="multiple cloning region"
regulatory 33..42
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
intron 77..150
/number=2
/note="white gene"
regulatory 254..273
/regulatory_class="promoter"
/note="SP6 RNA polymerase promoter"
promoter complement(255..273)
/label=SP6 promoter
/note="promoter for bacteriophage SP6 RNA polymerase"
primer_bind complement(291..307)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 315..331
/label=lac operator
/note="lac operator"
protein_bind 315..331
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(339..369)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 384..405
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(693..1281)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(1452..2312)
/codon_start=1
/gene="beta-lactamase"
/product="beta-lactamase"
/label=beta-lactamase
/protein_id="ABI82062.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(1452..2312)
/gene="beta-lactamase"
/label=beta-lactamase
promoter complement(2313..2417)
/gene="bla"
/label=AmpR promoter
misc_feature 2495..2950
/label=phage f1 region
/note="phage f1 region"
rep_origin complement(2495..2950)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 3091..3107
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 3114..3
/regulatory_class="promoter"
/note="T7 RNA polymerase promoter"
promoter 3114..2
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
LOCUS Exported 3130 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pGEM-WIZ, complete sequence.
ACCESSION DQ917671
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3130)
AUTHORS Bao S, Cagan R.
TITLE Fast cloning inverted repeats for RNA interference
JOURNAL RNA 12 (11), 2020-2024 (2006)
PUBMED 17005926
REFERENCE 2 (bases 1 to 3130)
AUTHORS Bao S, Cagan R.
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2006) Molecular Biology and Pharmacology,
Washington University, 660 South Euclid Ave, St. Louis, MO 63110,
USA
REFERENCE 3 (bases 1 to 3130)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3130
/organism="Cloning vector pGEM-WIZ"
/mol_type="other DNA"
/note="constructed by removing Drosophila white intron
2-containing XhoI/XbaI fragment of pWIZ and inserting it
into pGEM-S1"
/db_xref="taxon:404006"
misc_feature 10..243
/label=multiple cloning region
/note="multiple cloning region"
regulatory 33..42
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
intron 77..150
/number=2
/note="white gene"
regulatory 254..273
/regulatory_class="promoter"
/note="SP6 RNA polymerase promoter"
promoter complement(255..273)
/label=SP6 promoter
/note="promoter for bacteriophage SP6 RNA polymerase"
primer_bind complement(291..307)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 315..331
/label=lac operator
/note="lac operator"
protein_bind 315..331
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(339..369)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 384..405
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(693..1281)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(1452..2312)
/codon_start=1
/gene="beta-lactamase"
/product="beta-lactamase"
/label=beta-lactamase
/protein_id="ABI82062.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(1452..2312)
/gene="beta-lactamase"
/label=beta-lactamase
promoter complement(2313..2417)
/gene="bla"
/label=AmpR promoter
misc_feature 2495..2950
/label=phage f1 region
/note="phage f1 region"
rep_origin complement(2495..2950)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 3091..3107
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 3114..3
/regulatory_class="promoter"
/note="T7 RNA polymerase promoter"
promoter 3114..2
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"