LOCUS Exported 3029 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pFH2191, complete sequence.
ACCESSION AF325903
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3029)
AUTHORS Ostergaard H, Henriksen A, Hansen FG, Winther JR.
TITLE Shedding light on disulfide bond formation: engineering a redox
switch in green fluorescent protein
JOURNAL EMBO J. 20 (21), 5853-5862 (2001)
PUBMED 11689426
REFERENCE 2 (bases 1 to 3029)
AUTHORS Hansen FG.
TITLE Synthetic Escherichia coli codon-optimized green fluorescent protein
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 3029)
AUTHORS Hansen FG.
TITLE Direct Submission
JOURNAL Submitted (04-DEC-2000) Department of Microbiology, Technical
University of Denmark, Anker Engelunds Vej, Kgs. Lyngby DK-2800,
Denmark
REFERENCE 4 (bases 1 to 3029)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3029
/organism="Cloning vector pFH2191"
/mol_type="genomic DNA"
/db_xref="taxon:153040"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 143..173
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 181..197
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 205..221
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 217..999
/codon_start=1
/product="lacZ-GFP fusion protein"
/label=lacZ-GFP fusion protein
/note="green fluorescent protein gene codons optimized for
Escherichia coli"
/protein_id="AAK13447.1"
/translation="MTMITPSLHACRSTLEDPRVPHMSKGEELFTGVVPILVELDGDVN
GHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFAYGLQCFARYPDHMKRHD
FFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKL
EYNYNSHNVYIVADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHY
LSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMHELYK"
misc_feature 217..282
/label=Region: lacZ
/note="Region: lacZ"
promoter 1124..1228
/gene="bla"
/label=AmpR promoter
CDS 1229..2089
/codon_start=1
/product="beta-lactamase"
/function="confers resistance to ampicillin"
/label=beta-lactamase
/protein_id="AAK13448.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 2260..2848
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
LOCUS Exported 3029 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pFH2191, complete sequence.
ACCESSION AF325903
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3029)
AUTHORS Ostergaard H, Henriksen A, Hansen FG, Winther JR.
TITLE Shedding light on disulfide bond formation: engineering a redox
switch in green fluorescent protein
JOURNAL EMBO J. 20 (21), 5853-5862 (2001)
PUBMED 11689426
REFERENCE 2 (bases 1 to 3029)
AUTHORS Hansen FG.
TITLE Synthetic Escherichia coli codon-optimized green fluorescent protein
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 3029)
AUTHORS Hansen FG.
TITLE Direct Submission
JOURNAL Submitted (04-DEC-2000) Department of Microbiology, Technical
University of Denmark, Anker Engelunds Vej, Kgs. Lyngby DK-2800,
Denmark
REFERENCE 4 (bases 1 to 3029)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3029
/organism="Cloning vector pFH2191"
/mol_type="genomic DNA"
/db_xref="taxon:153040"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 143..173
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 181..197
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 205..221
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 217..999
/codon_start=1
/product="lacZ-GFP fusion protein"
/label=lacZ-GFP fusion protein
/note="green fluorescent protein gene codons optimized for
Escherichia coli"
/protein_id="AAK13447.1"
/translation="MTMITPSLHACRSTLEDPRVPHMSKGEELFTGVVPILVELDGDVN
GHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFAYGLQCFARYPDHMKRHD
FFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKL
EYNYNSHNVYIVADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHY
LSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMHELYK"
misc_feature 217..282
/label=Region: lacZ
/note="Region: lacZ"
promoter 1124..1228
/gene="bla"
/label=AmpR promoter
CDS 1229..2089
/codon_start=1
/product="beta-lactamase"
/function="confers resistance to ampicillin"
/label=beta-lactamase
/protein_id="AAK13448.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 2260..2848
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"