| 载体基本信息 |
| 载体名称 |
pFGUS2b |
载体抗性 |
Kanamycin |
| 载体长度 |
10970 bp |
载体类型 |
Binary vector |
| 载体来源 |
Zhang C, Chen ZJ. |
pFGUS2b 载体载体图谱
pFGUS2b 载体载体序列
LOCUS Exported 10970 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Binary vector pFGUS2b, complete sequence.
ACCESSION KC920578
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 10970)
AUTHORS Zhang C, Chen ZJ.
TITLE Regulation of NAC2 expression by miR164c mediates fertilizer
application-induced delay of leaf senescence
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 10970)
AUTHORS Zhang C, Chen ZJ.
TITLE Direct Submission
JOURNAL Submitted (18-APR-2013) Section of Molecular Cell & Developmental
Biology, The University of Texas at Austin, Austin, TX 78712, USA
REFERENCE 3 (bases 1 to 10970)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: Vector NTI v. Suite 8
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..10970
/organism="Binary vector pFGUS2b"
/mol_type="other DNA"
/db_xref="taxon:1473576"
misc_feature 1..27
/note="T-Border (Left); left border repeat from C58 T-DNA"
misc_feature 1..25
/label=LB T-DNA repeat
/note="left border repeat from nopaline C58 T-DNA"
terminator 111..363
/label=MAS terminator
/note="mannopine synthase terminator"
3UTR complement(111..362)
/note="MAS polyA; polyA signal from mannopine synthase"
CDS complement(373..924)
/codon_start=1
/gene="BAR"
/product="BAR"
/label=BAR
/note="Phosphinothricin acetyltransferase (PAT), conferring
tolerance to the herbicide phosphinothricin (PPT)"
/protein_id="AHN10444.1"
/translation="MSPERRPADIRRATEADMPAVCTIVNHYIETSTVNFRTEPQEPQE
WTDDLVRLRERYPWLVAEVDGEVAGIAYAGPWKARNAYDWTAESTVYVSPRHQRTGLGS
TLYTHLLKSLEAQGFKSVVAVIGLPNDPSVRMHEALGYAPRGMLRAAGFKHGNWHDVGF
WQLDFSLPVPPRPVLPVTEI"
gene complement(373..924)
/gene="BAR"
/label=BAR
regulatory complement(930..1310)
/regulatory_class="promoter"
/note="MAS promoter; mannopine synthase promoter"
promoter complement(930..1310)
/label=MAS promoter
/note="mannopine synthase promoter (Velten et al., 1984)"
misc_feature complement(1317..1592)
/note="NOS terminator sequence to insulate MAS promoter
from the promoter to be cloned; or to be used as a polyA
when a second transgene is inserted."
terminator 1332..1584
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
misc_feature 1593..1695
/note="Multiple Cloning Sites (MCS); MCS; synthetic linker
sequence including 9 unique restriction sites"
CDS join(1696..1710,1901..3721)
/codon_start=1
/gene="gusA"
/product="GUS (beta-glucuronidase)"
/label=gusA
/protein_id="AHN10445.1"
/translation="MVDLRNRRLVRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWES
ALQESRAIAVPGSFNDQFADADIRNYAGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGK
VWVNNQEVMEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGK
KKQSYFHDFFNYAGIHRSVMLYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSV
ELRDADQQVVATGQGTSGTLQVVNPHLWQPGEGYLYELCVTAKSQTECDIYPLRVGIRS
VAVKGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYP
YAEEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQA
IKELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCD
AHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVDT
LAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGNKK
GIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQGGKQ"
gene 1696..3721
/gene="gusA"
/label=gusA
/note="GUS coding sequence amplified from pCAMBIA1381Z;
without immunoTag; with confirmed sequence (10 nt
corrected)"
intron 1711..1900
/label=cat1 intron
/note="castor bean catalase intron, modified"
CDS 1916..3721
/codon_start=1
/gene="uidA (or gusA) from E. coli"
/product="beta-glucuronidase"
/label=GUS
/translation="RPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRAIAV
PGSFNDQFADADIRNYAGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQEVME
HQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSYFHDFF
NYAGIHRSVMLYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRDADQQVV
ATGQGTSGTLQVVNPHLWQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAVKGEQFLI
NHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDWAD
EHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKN
HPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCDAHTDTISDLF
DVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYTD
MWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRKPK
SAAFLLQKRWTGMNFGEKPQQGGKQ"
misc_feature 3728..1310
/label=sequence from pFGCGW INSD accession DQ231581.1
/note="sequence from pFGCGW INSD accession DQ231581.1"
3UTR 3728..4447
/note="OCS polyA; polyA signal from octopine synthase"
terminator 3738..4445
/label=OCS terminator
/note="octopine synthase terminator"
primer_bind complement(4474..4490)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 4693..4717
/label=RB T-DNA repeat
/note="right border repeat from nopaline C58 T-DNA"
misc_feature 4693..4716
/note="T-Border (Right); right border repeat from C58
T-DNA"
rep_origin complement(5778..6778)
/direction=LEFT
/label=pVS1 replication origin
/note="pVS1 replication origin"
CDS 6017..6646
/codon_start=1
/product="stability protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
/label=pVS1 StaA
/translation="MKVIAVLNQKGGSGKTTIATHLARALQLAGADVLLVDSDPQGSAR
DWAAVREDQPLTVVGIDRPTIDRDVKAIGRRDFVVIDGAPQAADLAVSAIKAADFVLIP
VQPSPYDIWATADLVELVKQRIEVTDGRLQAAFVVSRAIKGTRIGGEVAEALAGYELPI
LESRITQRVSYPGTAAAGTTVLESEPEGDAAREVQALAAEIKSKLI"
CDS 7080..8147
/codon_start=1
/product="replication protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
/label=pVS1 RepA
/translation="GRKPSGPVQIGAALGDDLVEKLKAAQAAQRQRIEAEARPGESWQA
AADRIRKESRQPPAAGAPSIRKPPKGDEQPDFFVPMLYDVGTRDSRSIMDVAVFRLSKR
DRRAGEVIRYELPDGHVEVSAGPAGMASVWDYDLVLMAVSHLTESMNRYREGKGDKPGR
VFRPHVADVLKFCRRADGGKQKDDLVETCIRLNTTHVAMQRTKKAKNGRLVTVSEGEAL
ISRYKIVKSETGRPEYIEIELADWMYREITEGKNPDVLTVHPDYFLIDPGIGRFLYRLA
RRAAGKAEARWLFKTIYERSGSAGEFKKFCFTVRKLIGSNDLPEYDLKEEAGQAGPILV
MRYRNLIEGEASAGS"
rep_origin 8213..8407
/label=pVS1 oriV
/note="origin of replication for the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
misc_feature 8751..8891
/label=bom
/note="basis of mobility region from pBR322"
rep_origin complement(9077..9665)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
rep_origin 9181..9462
/label=pBR325 replication origin
/note="pBR325 replication origin"
CDS complement(9752..10546)
/codon_start=1
/gene="aadA"
/product="kanamycin (R)"
/label=aadA
/note="aadA (kanamycin resistance) gene amplified from
pIG121Hm"
/protein_id="AHN10446.1"
/translation="MAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKM
TDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED
EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT
PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIA
FCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF"
gene complement(9752..10546)
/gene="aadA"
/label=aadA