LOCUS Exported 4151 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pEG, complete sequence.
ACCESSION KT962975
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4151)
AUTHORS Zhou Y, Zhang L, Shah N, Palmer R Jr.
TITLE Cell-surface glycoside hydrolases of Streptococcus gordonii promote
growth in saliva
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4151)
AUTHORS Yang J, Cisar JO.
TITLE Direct Submission
JOURNAL Submitted (26-OCT-2015) Laboratory of Cell and Developmental
Biology, National Institute of Health, 9000 Rockville Pike,
Bethesda, MD 20854, USA
REFERENCE 3 (bases 1 to 4151)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4151
/organism="Cloning vector pEG"
/mol_type="other DNA"
/db_xref="taxon:1775243"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 402..599
/regulatory_class="promoter"
/note="consititutive promoter located upstream of
Streptococcus gordonii rpsJ gene"
CDS 600..1316
/codon_start=1
/gene="GFP"
/product="green fluorecent protein"
/label=GFP
/note="codon optimized"
/protein_id="ALU57381.1"
/translation="MRKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
gene 600..1316
/gene="GFP"
/label=GFP
misc_feature 1320..1376
/label=multiple cloning site
/note="multiple cloning site"
primer_bind complement(1389..1405)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1413..1429
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1437..1467)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1482..1503
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin 1776..2376
/label=ori of pUC19
/note="ori of pUC19"
rep_origin complement(1791..2379)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS 2951..3688
/codon_start=1
/gene="ermAM"
/product="erythromycin resistant protein"
/label=ermAM
/protein_id="ALU57382.1"
/translation="MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT
KLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGNIPYH
LSTQIIKKVVFESHASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFH
PKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNN
LSTVTYEQVLSIFNSYLLFNGRK"
gene 2951..3688
/gene="ermAM"
/label=ermAM
promoter complement(3952..4056)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 4151 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pEG, complete sequence.
ACCESSION KT962975
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4151)
AUTHORS Zhou Y, Zhang L, Shah N, Palmer R Jr.
TITLE Cell-surface glycoside hydrolases of Streptococcus gordonii promote
growth in saliva
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4151)
AUTHORS Yang J, Cisar JO.
TITLE Direct Submission
JOURNAL Submitted (26-OCT-2015) Laboratory of Cell and Developmental
Biology, National Institute of Health, 9000 Rockville Pike,
Bethesda, MD 20854, USA
REFERENCE 3 (bases 1 to 4151)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4151
/organism="Cloning vector pEG"
/mol_type="other DNA"
/db_xref="taxon:1775243"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 402..599
/regulatory_class="promoter"
/note="consititutive promoter located upstream of
Streptococcus gordonii rpsJ gene"
CDS 600..1316
/codon_start=1
/gene="GFP"
/product="green fluorecent protein"
/label=GFP
/note="codon optimized"
/protein_id="ALU57381.1"
/translation="MRKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
gene 600..1316
/gene="GFP"
/label=GFP
misc_feature 1320..1376
/label=multiple cloning site
/note="multiple cloning site"
primer_bind complement(1389..1405)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1413..1429
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1437..1467)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1482..1503
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin 1776..2376
/label=ori of pUC19
/note="ori of pUC19"
rep_origin complement(1791..2379)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS 2951..3688
/codon_start=1
/gene="ermAM"
/product="erythromycin resistant protein"
/label=ermAM
/protein_id="ALU57382.1"
/translation="MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT
KLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGNIPYH
LSTQIIKKVVFESHASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFH
PKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNN
LSTVTYEQVLSIFNSYLLFNGRK"
gene 2951..3688
/gene="ermAM"
/label=ermAM
promoter complement(3952..4056)
/gene="bla"
/label=AmpR promoter